Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01516 ATGGCTTTTCGCATTCCAAGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAACCTTCATTTCAGGAGTTACTAAGCCAATCAGAAGAAGAATTCAGTTATGATCACCCAACTGGCGGTCTCACTATTCCTTGCAGCGAGCATACATTCCTGAACCTCACTTGTGAATTAAGTGGCCAGTAA 267 0.4195 MAFRIPSIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLSQSEEEFSYDHPTGGLTIPCSEHTFLNLTCELSGQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01516 88 Pfam Auxin responsive protein 10 83 IPR003676 GO:0009733
Aip03g01516 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Aip03g01516 88 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01516 Aip-Chr3 16551429 16551695 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01516 20 78 Calmodulin-binding Proteins AT3G43120 55.932 8.58e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01516 K14488 - gmx:100782363 119.783