Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01515 ATGGGTTTCCGTTTACCTGTTATTCGAAGGACATCATCATTCTCAGCTAGCCAAGCAGCTTCTAAATCTGTGGAAGTCCCAAAGGGGCATCTAGCAGTGTATGTCGGAGAGAAACAGAAGCGGTTTGTGATCCCCGTTTCATACTTGAACCAACCTTCAATCCAAGACTTGTTGAGCCAAGCTGAGGAAGAGTTCGGATATGATCATCCTATGGGAGGTCTAACAATTCCTTGCAGTGAAGATGTCTTCCAACAAATCACTTCTCGCTTGAATTGA 276 0.4457 MGFRLPVIRRTSSFSASQAASKSVEVPKGHLAVYVGEKQKRFVIPVSYLNQPSIQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQQITSRLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01515 91 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Aip03g01515 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
Aip03g01515 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01515 Aip-Chr3 16549508 16549975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01515 5 84 Calmodulin-binding Proteins AT5G20810 46.250 3.72e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01515 K14488 - gmx:106798972 151.754