Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01513 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGACTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCTTAAATCTCATCTGTACCTACCTCATGTGCCTCACTGGAATCATCGCTGCCAAGATAGGTACTCTTTCGAAACTTGTCACTCTTGATCTGTCCTATAATAATCTTCATGGAAAGCTTCCAAGATCACTTTCAAGTCTTACTCAACTCATAGTTCTTGATGTTTCCTTCAATTCTCTTAGCGCTACCATTCGTTCTAAGTTGGGTGAATTCAAGAATCTAACATTTCTTTCACTTGCTTCAAACCGAATCGAAGGTCCTATACAACAACAGTTAGGGACTTTAAGAGACTTACAAGAACTACATCTCTCAAATAGAAGAAGTTGCTGCAGAGAATGA 570 0.3982 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQTSFQELLNQAEEEFGYDHPTGGLTIPCSEDEFLNLICTYLMCLTGIIAAKIGTLSKLVTLDLSYNNLHGKLPRSLSSLTQLIVLDVSFNSLSATIRSKLGEFKNLTFLSLASNRIEGPIQQQLGTLRDLQELHLSNRRSCCRE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01513 189 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 83 IPR003676 GO:0009733
Aip03g01513 189 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 83 - -
Aip03g01513 189 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515
Aip03g01513 189 Gene3D Ribonuclease Inhibitor 72 185 IPR032675 -
Aip03g01513 189 PRINTS Leucine-rich repeat signature 103 116 - -
Aip03g01513 189 PRINTS Leucine-rich repeat signature 124 137 - -
Aip03g01513 189 SUPERFAMILY L domain-like 87 183 - -
Aip03g01513 189 Pfam Auxin responsive protein 15 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01513 Aip-Chr3 16544743 16545973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01513 14 82 Calmodulin-binding Proteins AT3G43120 52.174 3.11e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01513 K14488 - gmx:100782363 135.191