Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01509 ATGGCTTTCGGCATACCAGGTATTAGAAAAGCAACAAAGAGCAATGATGTCCCAAAAGGCTATCTTGCAGTTTATGTTGGAGATAAAATGAAGAGGTTTTTAATTCCTATATCATACTTGAACCAACCTTTGTTTCAAGACTTGCTAAACCAAGCAGAAGAAGAATTCAGTTATGATCATCCGAATGGCGGTCTCACAATTCCATGCGAGGAGGATGAGTTCTTAAACCTCACTTCTCAGTTGAGTAGGCTATAA 255 0.3882 MAFGIPGIRKATKSNDVPKGYLAVYVGDKMKRFLIPISYLNQPLFQDLLNQAEEEFSYDHPNGGLTIPCEEDEFLNLTSQLSRL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01509 84 Pfam Auxin responsive protein 11 79 IPR003676 GO:0009733
Aip03g01509 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 82 IPR003676 GO:0009733
Aip03g01509 84 PANTHER AUXIN-INDUCED PROTEIN 10A5 10 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01509 Aip-Chr3 16539631 16539885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01509 16 74 Calmodulin-binding Proteins AT3G43120 59.322 1.84e-20 78.2