Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01504 ATGGGCTTCCGTTTACCTGTTATTCGAAGGGCATCATCATTCTCAGCTAGCCAAGCAGCTTCAAAATCTGTGGAACTCCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAATCAAAAGCGTTTTGTGATCCCCGTATCATACTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCACTATTCCTTGTAGCGAACATGTCTTCCAAAGAATCACTTCTGGCTTGAATGGGCTATAA 282 0.4326 MGFRLPVIRRASSFSASQAASKSVELPKGYLAVYVGENQKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQRITSGLNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01504 93 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Aip03g01504 93 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Aip03g01504 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01504 Aip-Chr3 16532336 16532617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01504 15 84 Calmodulin-binding Proteins AT3G43120 47.143 4.87e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01504 K14488 - gmx:100816803 151.369