Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01503 ATGCCGAGTCCATTGTCTTATTTACTCTCTATAAACACAAACATTGGCAGTAATAGCCCTGTTATTCTCAACTCTTTTCCTCAAGACAAGTGGAATCATGAAAGCGCCACCACCACCGCCTCTTTTCAACAAGTCAACCTTTCGAATCACGATCATCATCACAACACGAGACAAGAGTTAGACTTCTTCGTCACTCATCACAACGACGACAACCGTATCGCCTCTTCTTCTTTCCCTGCCGCCGACCACGATAACAATCATCGTCATTCCTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTCACTACCAGCACTACGGAGGACGATCACGTAAATTTGCAAGACAGAAGAACTAAACTTGAGGAGGTAGGTGTAATTGAAGCGGAGATAGAGCGAGTGAAGGAGGAGAATGAAAGGATAAGGGAGATGATTGATGAGGCAAACAGTCATTACAGTGCGCTTCAGATGCACCACATGAATCTCATGAACAAGAGCAGTGACGATGAAAGAGTATTGGTTCCAAGGCAGTTTATGGATCTAGGCTTAGCAACAAATTCGCACAATTGTTCATCATCACGATCAAGATCAAAATCACCATCAGGGAATAGTAGTGGTGGTGATGGAGAGAAGAAGAGAATGAAAAGAGAAGAAAGCCCGATGAGGGAAGAAGAAGCAAACAAAATAGAGAGGTCAAGTAGTCCAGCAAAACATAATCTTGACCAAGCTCACGAGGCCACTATGAGGAAAGCTAGAGTTTCTGTTAGAGCCAGATCAGAGGCACCTATGATAACTGATGGGTGTCAATGGCGAAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCCGGTTGTCCAGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGATAGAACAGTGTTAGTGACAACATATGAAGGGAAGCACAACCACCCTTTGCCACCGGCAGCAATGGCTATGGCGCAAACAACTTCCTCAGCCGCAACAATGCTTCTTTCTGGTTCATCAATGTCAACCAATGACAACACCACCCTAATCAACAATGCAACAAACTTCTTAGCAACAACACTTCTTCCATCTTCTTCATCATCATCATCAGCTGCTACTTCAACCATGGCAACAATCTCAGCTTCAGCACCATTCCCAACTATCACATTGGACCTTACTCATGATGACTCCCCCATCAACAACAACAACAACCACCCTTTTCAGTTCCCAATAAGGCCTAGTACAATTCCACAAATACCCTTCAACATATTTGGTGGTAATAGTAGTAATAATAATAGCAATAACCAATCAAAGTTTTGTGGTCTACAAATGCCTAATAATAATAATAAAGATCATAGTAATAGTAGTAGTAGTAGTAACAATCTTGTTGATACAGTTGGTGCTGCAATTGCATCTGATCCAAACTTCACTGCTGCTTTGGTATCAGCTCTTAGCTCCTTTATTAGTGCTGCTGCTCCTACTCAACAAAACAACATTAGCAATAGCAATGACAATGGCAATGGCACACTCAACAACAATAGCTAG 1566 0.4259 MPSPLSYLLSINTNIGSNSPVILNSFPQDKWNHESATTTASFQQVNLSNHDHHHNTRQELDFFVTHHNDDNRIASSSFPAADHDNNHRHSLEFKVNTGLNLLTTSTTEDDHVNLQDRRTKLEEVGVIEAEIERVKEENERIREMIDEANSHYSALQMHHMNLMNKSSDDERVLVPRQFMDLGLATNSHNCSSSRSRSKSPSGNSSGGDGEKKRMKREESPMREEEANKIERSSSPAKHNLDQAHEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLVTTYEGKHNHPLPPAAMAMAQTTSSAATMLLSGSSMSTNDNTTLINNATNFLATTLLPSSSSSSSAATSTMATISASAPFPTITLDLTHDDSPINNNNNHPFQFPIRPSTIPQIPFNIFGGNSSNNNSNNQSKFCGLQMPNNNNKDHSNSSSSSNNLVDTVGAAIASDPNFTAALVSALSSFISAAAPTQQNNISNSNDNGNGTLNNNS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01503 521 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g01503 521 MobiDBLite consensus disorder prediction 184 261 - -
Aip03g01503 521 SUPERFAMILY WRKY DNA-binding domain 257 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g01503 521 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 515 IPR044810 GO:0003700
Aip03g01503 521 MobiDBLite consensus disorder prediction 502 521 - -
Aip03g01503 521 MobiDBLite consensus disorder prediction 184 206 - -
Aip03g01503 521 MobiDBLite consensus disorder prediction 429 467 - -
Aip03g01503 521 Gene3D WRKY domain 249 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g01503 521 Pfam WRKY DNA -binding domain 266 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g01503 521 Coils Coil 124 151 - -
Aip03g01503 521 MobiDBLite consensus disorder prediction 208 256 - -
Aip03g01503 521 PANTHER OS05G0567200 PROTEIN 37 515 - -
Aip03g01503 521 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01503 Aip-Chr3 16521584 16524574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01503 59 495 WRKY Transcription Factor Family AT1G62300 45.738 3.40e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g01503 WRKY 5.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01503 - - ahf:112737496 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01503 03 16521584 16524574 Aip03g01503 03 16521584 16524574 ECH
Aip03g01503 03 16521584 16524574 Aip04g00520 04 6174956 6177370 ECH
Aip08g00729 08 7145661 7147396 Aip03g01503 03 16521584 16524574 PCT