Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01500 ATGGAATTCAAGCGTATGTTCAACAGTGAGGGTAAAAACTCGGATGGAAGTACCTCGAATGATAGTTGCGGATATTATTATGCGAGTGACGATGAATGGGACGAGGACGAAGGCCTCGAGTGCTATGAGGGCTGCGAATCCGGGGAAAAAAGTGTAGGGGATGCCGTCGATGGTAATAGGTCGGGTGGTGCAGATGATGTGGCAGAGGGTGGTCTCAGCCGTCCAGTCGATACACAAGACTTCTCGGGAAAAGAGTTTGCAACGGAGGAGGATGCTTATGCTGCCTACAAGGAGTTTGCTAAATTAAGGGGCTTTGGAGTTCGAAAGGGAGATGTAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTCTGCCATCGACAAGGTACAAGACATCCTAAGCACTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGTTGGAGAGTTGTACCGATTGTAAGGCAACGTTGAAGATTTACTATGATATGCAACATAGCGTGTGGAGGGTGAGAACCATCGTGGATGAACACAACCACGAGCTTGCCCCAACAGTGTTCACACATTTCCTTCCTAGTCATCAGAAGATGAGTGATGACAACAAGGCACAGGTGGATAGTTTCAAGCAGTTCGGGAGCTCCACGTCAAAAATAATGGCTTACATGGCGGGGCAATCTGGTGGGTATGGCATGCTTCGATTTACAAAACGAGAAGAGCTCAGAAGAACTCAGAAGAAGAAGAGCTTTGCATCTGAACTCAAATTTGGACTAAATTCCTCATTGAATAAAAAATTAATTGAAAAAAACAAAAACCCAAGAAGTTAA 825 0.4594 MEFKRMFNSEGKNSDGSTSNDSCGYYYASDDEWDEDEGLECYEGCESGEKSVGDAVDGNRSGGADDVAEGGLSRPVDTQDFSGKEFATEEDAYAAYKEFAKLRGFGVRKGDVARVNGVLIRRDFFCHRQGTRHPKHYDRPERVREERLESCTDCKATLKIYYDMQHSVWRVRTIVDEHNHELAPTVFTHFLPSHQKMSDDNKAQVDSFKQFGSSTSKIMAYMAGQSGGYGMLRFTKREELRRTQKKKSFASELKFGLNSSLNKKLIEKNKNPRS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01500 274 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 30 241 - -
Aip03g01500 274 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g01500 274 Pfam FAR1 DNA-binding domain 96 184 IPR004330 -
Aip03g01500 274 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 241 - -
Aip03g01500 274 MobiDBLite consensus disorder prediction 48 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01500 Aip-Chr3 16494308 16495132 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01500 FAR1 4.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01500 - - aip:107632719 567.77