Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01476 ATGGAAACCATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATACAGCAGTTTGCTAACCTTAGTGACGGTTAGATGTGGACATTGTGCCAATTTGCTAACAGTTAACATGGGAGCATCACTTCAACCGTTAATACCACCTCATCAAGAACATCATCATCAGTCACAGAAACAGCACCTAAGCTTTGAAGAATCAAGCAGCTGCAAAGAACTGGGATCATCATCTTCAAAATGTAACAAAATTGCGCCATTTGAGCCTGTAGAGAGTCATCAATCACATAGGATTCCTCCCATTCGTCCTCCGGAGAAGAGACAACGTGTTCCATCTGCTTATAACCGATTCATTAAGGAGGAAATTCAAAGGATCAAGGCCAGTAATCCAGATATTAGCCACAGGGAAGCTTTCAGCACAGCTGCTAAAAACTGGGCACATTTCCCTCATATTCACTTTGGATTAAAGATGGATGGCAATAATGACAAGCAAGCAAAGTTGGACCATAATAATGGTGAAGGAACTCAAAAGTCTAGTAATGGATTCTACTGA 582 0.4175 METMMATERVCYVHCNFCNTILAVSVPYSSLLTLVTVRCGHCANLLTVNMGASLQPLIPPHQEHHHQSQKQHLSFEESSSCKELGSSSSKCNKIAPFEPVESHQSHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKMDGNNDKQAKLDHNNGEGTQKSSNGFY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01476 193 Pfam YABBY protein 6 165 IPR006780 GO:0007275
Aip03g01476 193 MobiDBLite consensus disorder prediction 57 77 - -
Aip03g01476 193 Gene3D High mobility group box domain 102 160 IPR036910 -
Aip03g01476 193 MobiDBLite consensus disorder prediction 98 121 - -
Aip03g01476 193 MobiDBLite consensus disorder prediction 167 193 - -
Aip03g01476 193 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 5 193 - -
Aip03g01476 193 PANTHER PROTEIN YABBY 6-RELATED 5 193 IPR006780 GO:0007275
Aip03g01476 193 SUPERFAMILY HMG-box 109 158 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01476 Aip-Chr3 16168492 16178628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01476 1 193 C2C2-YABBY Transcription Factor Family AT1G08465 60.104 4.40e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aip03g01476 YABBY 1.9e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01476 K25796 - gmx:100500026 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00717 08 6907440 6916400 Aip03g01476 03 16168492 16178628 PCT