Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01451 ATGGATCTGCAATGTTGCCAAATCGAAACCAAGCTAAGGTTCTGTTTCTCTGTCTGGCTTTCCGTACAGAAGAAGAAGAATCACAGAGAACAGAAAAAGATGGCAACGTACTTTCATGGCGGCAACAGTGGCACAACCGTGACTGTTCTTCCGAATAACCGTGACTATTCGGAACATACAGTTACAACTGCAACAACAGAAATGGGATTTCATAGAGCGAGAGGCCATCAATCCCATCATCATCCGCAAGGGTTGTCACTTAGTCTTTCCTCTCAACAACTTCCGTTTAGGTCTTTTGCCAACGCCGGTGGGGCTTTGAATAGTAGTATACAAAGTGTTGTACTTGGATCCAAGTTTCTGAAAGTGGCACAGGAGCTTCTTGATGAAGCCGTTAACGTGGGTAACGATAATAAGGTGGATTATTCCAACAATAAAGAGAAGATGAAAGGGAATAAAAATGTTGAATCCACGTCTGATGGTGGCGGTGATGATAATAGATCAAGTGGTGGGGGCGACGGTGAAAATAGTGGTGGTGACAACAAGCAAGGAAGTGAACTCAACACTGCTCAAAGACAAGAGCTTCATATGAATAAGTCCAAGCTTGTTACCATGCTTGATGAGGTGGAGCAAAGATACCGAGAGTACAAGCAACAAATGCAAATTGTGACGTCATCATTTGAGGAAGCAGCTGGTTATGGAGCTGCAAGAACATACACAGCACTTGCATTGAAGACAATATCGAAGCAATTTCGGTGCCTAAAAGATGCAATATCTTTGCAGATCAAAACGACTGGCAAGACGCTAGGTGAAGACAACTGCATGGGAGTTAAAGTCGAGGGTTCAAGGCTTAGATTCATTGATCACAATCTCCGGCAACAAAGGGCGCTTCAACAGTTGGGAATGATACAACACAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCGGTTTCTATTCTTCGAGCTTGGCTTTTCGAACATTTTCttcacccTTATCCAAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGCCAGGTATCAAACTGGTTTATAAATGCCCGAGTTAGGCTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAATTAAGGATCAAGAACACAACAACAATAATGGCTCCCAAGATGATGATGATGATGACACTAACACCGCCAACAAGAAGAAGAAGCAGCTAATAAGAGAATCATCAAACAAGGAATTATGGTCATCATCATCATCACAATTAGAACAACCACCATGTAGTAGTAGTGTCATTAGACTTGACCACTTAAACTCCAACCAAAACACCACTACTCCAATAACTGAGATCTCAGCAAATTCCAACAACAATTCAATCTCAACATCTCCATTGAATCTAAGGAATCCTCATCATGAGATTATGAACTCTCCAGGTACCATTCTTTTCTTCTTCTTCTTTGTTTTTCCTTTTTTTTTTTTCTCGAGAAATCTTTCTGTGGACATGGAAATGAAGCCGATAAGAGAGACAAATAGCAACAACAACAACAACCACCTAAATTTTGGAATTGAATTAGGGAACCCTAATAAAGACGGTTACCCTTTGATGGCTTCTTTTGGGAATGAAAACCACGACGGTGGCGGGGGTAGCGGTAGCGGTTATGGTTCTACTACATTCTCCATGGAAGACATTGGAAGGTTCCATCAACAATTGGTGGCTCCAAGGTTCCATGGGAATGGTGTTTCACTCACTCTAGGGCTTCCACCAAGTGATAACAACAACACCAACAATAACTTTCCATCCCAACAAGTAGAGTTTCTCTCCTCACACAACATGCATTTGGGAGGAGGAGGAGGAGGAGGAGGAAGGATTCATCATCATCATCACGAGATTGAAGCAGCAACCAATGATGATGAGTTTTGTGGAATGAAGAACAATGCCACAACACCTTCTTCTCATTCAGGAACAAGTTATGATCATAACAACAACAACATTGACATGTGGGGTCAGTTTTGGAGGGTCTGA 2025 0.4207 MDLQCCQIETKLRFCFSVWLSVQKKKNHREQKKMATYFHGGNSGTTVTVLPNNRDYSEHTVTTATTEMGFHRARGHQSHHHPQGLSLSLSSQQLPFRSFANAGGALNSSIQSVVLGSKFLKVAQELLDEAVNVGNDNKVDYSNNKEKMKGNKNVESTSDGGGDDNRSSGGGDGENSGGDNKQGSELNTAQRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARTYTALALKTISKQFRCLKDAISLQIKTTGKTLGEDNCMGVKVEGSRLRFIDHNLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEHNNNNGSQDDDDDDTNTANKKKKQLIRESSNKELWSSSSSQLEQPPCSSSVIRLDHLNSNQNTTTPITEISANSNNNSISTSPLNLRNPHHEIMNSPGTILFFFFFVFPFFFFSRNLSVDMEMKPIRETNSNNNNNHLNFGIELGNPNKDGYPLMASFGNENHDGGGGSGSGYGSTTFSMEDIGRFHQQLVAPRFHGNGVSLTLGLPPSDNNNTNNNFPSQQVEFLSSHNMHLGGGGGGGGRIHHHHHEIEAATNDDEFCGMKNNATTPSSHSGTSYDHNNNNIDMWGQFWRV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01451 674 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 68 607 - -
Aip03g01451 674 SMART HOX_1 307 371 IPR001356 GO:0003677
Aip03g01451 674 ProSiteProfiles 'Homeobox' domain profile. 304 367 IPR001356 GO:0003677
Aip03g01451 674 MobiDBLite consensus disorder prediction 154 184 - -
Aip03g01451 674 MobiDBLite consensus disorder prediction 378 429 - -
Aip03g01451 674 Gene3D - 303 380 - -
Aip03g01451 674 SMART prehox3 108 259 IPR006563 -
Aip03g01451 674 Coils Coil 198 225 - -
Aip03g01451 674 MobiDBLite consensus disorder prediction 411 429 - -
Aip03g01451 674 MobiDBLite consensus disorder prediction 378 410 - -
Aip03g01451 674 CDD homeodomain 307 368 IPR001356 GO:0003677
Aip03g01451 674 Pfam Associated with HOX 113 258 IPR006563 -
Aip03g01451 674 Pfam Homeobox KN domain 324 363 IPR008422 GO:0003677|GO:0006355
Aip03g01451 674 MobiDBLite consensus disorder prediction 135 184 - -
Aip03g01451 674 SUPERFAMILY Homeodomain-like 308 373 IPR009057 -
Aip03g01451 674 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 68 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01451 Aip-Chr3 15561598 15567210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01451 83 592 Homeobox Transcription Factor Family AT2G35940 44.505 1.04e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip03g01451 POX 1.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01451 - - aip:107629786 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00699 08 6659668 6663888 Aip03g01451 03 15561598 15567210 PCT