Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01448 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTCTGTGCTCGGAACCAGTGGTCTTATGCGGTGTTTTGGAAGATCGGATGTAATAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTACGAACCCTTGCCGTCTCCTTTTCCGGCAAGCGTTGCCGGGGAGGGAAGCTGGTTTTCTTCGGAGTCTCAGTTGTCGCAGCTAGGAATTCAGGACGAGGACAGAGTCTGTTCTTTGATTAACAAAATGATGGTGAATAATTCAGTCAATATAGCTGGTGAAGGGATAATTGGACGGGCAGCGTTTACGGGAAACTACCAGTGGATTCTATTGAACAATTTTACAAGAAATGCATATCCACCTGAGGTGTATACTGAGGTTCATCACCAATTTTTAGCTGGAATACAGACAATAGTGGTTATTCCTGTGCTTCCGCATGGTGTTGTACAACTTGGTTCTTTTTTACCGATAATGGAAAATATTGGATTTGTGAATGATGTGAAGAGCTTGATCTTACAATTGGGATGTGTTCCTGGTGCCCTTTTATCTGATGATTACTCAGCAAAACTTTCTACCATAAGTCTTGGAAAACCTGCTAATGTCGGTATACCTGTGTCTGTTGATCCACCAGTTGTTACCCCAAACTGCCCTCCTTTTATAGCCGGTGGCTCGAACCAAGCAAGTAATTCATCTCATGTTCCAAAGTCTATTGTTCAACACATAAATAATTATGACGGTTTGATAGTGACGCCTCAAAGCCGTAACATAAACCAGATATCATCCAAATACCATAATGAACCTTGTAAACCTAATGACCACTCAATAACCGAAACAAACGTCAGTGGCCAACAAGAGAGTATGGTTGTGAAGGCTGAAGCTGAATTGATGCCATCAAATTTCAGTTCATGTATGCAAAAGCAATCTGGTTCTTATAATACAAGATCTGCATACAATGATTTAGCCAGTTTCCGCCAACCAAGTCTCGGTGATTGCAGCCTTAAATACATGGAACAGCAAATCTTATCTGGAGTTGGGAGACAAAGTCATGTTAGTCCTAATATGAACACATCAAGCACCTTAAATATGGCTCAACTGAAAACAAATAGCAGCCGTATTCTCGGATGTGTCCACAGTTCTCCAAATTCTTCAGTTCTTGGAGGAGTCCCAACATCTGGTGGCATGACTAATCTTATGAGGACAGAAAATGTTGGCGTTGGACTTAAAAATGATAGATCAACTAGAGCTGGCATGCATTCTGTGTCTAATTTGACCAATCAATCAGTAACCACTCACATGCCTTCAGAAGATTCTGATCAGAAGAATCATACTGTTGATTTAAAGCGTGCTTATGATGCTCTGGCTTCGTTGGATCAAGGGCTAGATGATGTGATGCTTCAGGACTTTAAAATCCCATCTCTTCATCTTGAGGAGCATGTATCCATGAACGATCACATCTCGGGGTTTGTTGGTGATTGTCTCATTAAGGATGCTGCTAGTCAACATATGATGGGAAATGCTAAACATGAAGAAGCTTGCACTCAACCTCCATCGAGTGACGACCTCTTTGATGTTTTAGGTGCAGATTTTAAAATGAAACTGCTGAATGGAAACTGGAATACGTTGCTTGCTGATGAACCAGGTGCCGGTGCTGAAAACTTGGATAACAAGCCAACATATATGAATATGCATGGAGCTCCAAGTAGATCGATAAGCGAAACAATATCAAGCAGTGGTATCATCTCTGCCACCTGCACTGACAACCTCTTAGATGCTGTGATCTCAAGGGCTCAATCTGCTTCTGCCGGGAAACAGAATTCCGATGATATGTCATGCAGGACAACAGTGACAAGGACTAGTACCTCCTCAACTCCTCCCTCCCCGGCCTGTAAACAAGTTCTGTTTGATGTTCCCAAGACGGGGGACAAGATAGGTTCAGCCGAAACCAGTTCTGCTAAGAACACTTCCATTTATGGATCTCAACTTAGTTCCTGGATTGAGAATGGGAGCAGTGTGAAGTGTGAGAACAGCGTTTCGACTGGATACTCTAAGAAGCCAGATGAAGGTAAATCAAACCGTAAAAGGCTCAAGCCTGGAGAGAACCCCCGCCCTCGACCCAAAGATCGCCAAATGATTCAGGATCGTGTGAAAGAGTTACGTGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATTCACTATTGGAAAGGACTATCAAGCACATGCTTTTCTTGCAAAGTGTAACGAAGCATGCCGACAAGCTGAAACAAACTGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGATTGCTTTTGAGAGATAATTTCGAGGGAGGAGCGACGTGGGCGTATGAGGTTGGTTCACAGTCAATGGTTTGCCCTATCATAGTCGAGGATCTGAGTCCCCCGCGTCAGATGCTAGTTGAGATGCTTTGCGAGGAGCGCGGTTTCTTTCTCGAAATAGCCGACTTAATCCGAGGACTAGGCTTAACCATCTTAAAGGGTGTCATGGAAACTCGCAATGACAAGATTTGGGCGCGCTTTGCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCGCTGGTTCGTCTTTTGGAGCAAACAGTGAAGGGAAATGCATCTTCATCGAATGCAGTCGACAACATGATGGCTTATCATTCTTTTCCACAAGCTACCCAGATACCAGCGACCGGTATGCCTACTAGTTTGCAATGA 2724 0.4328 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSPFPASVAGEGSWFSSESQLSQLGIQDEDRVCSLINKMMVNNSVNIAGEGIIGRAAFTGNYQWILLNNFTRNAYPPEVYTEVHHQFLAGIQTIVVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCVPGALLSDDYSAKLSTISLGKPANVGIPVSVDPPVVTPNCPPFIAGGSNQASNSSHVPKSIVQHINNYDGLIVTPQSRNINQISSKYHNEPCKPNDHSITETNVSGQQESMVVKAEAELMPSNFSSCMQKQSGSYNTRSAYNDLASFRQPSLGDCSLKYMEQQILSGVGRQSHVSPNMNTSSTLNMAQLKTNSSRILGCVHSSPNSSVLGGVPTSGGMTNLMRTENVGVGLKNDRSTRAGMHSVSNLTNQSVTTHMPSEDSDQKNHTVDLKRAYDALASLDQGLDDVMLQDFKIPSLHLEEHVSMNDHISGFVGDCLIKDAASQHMMGNAKHEEACTQPPSSDDLFDVLGADFKMKLLNGNWNTLLADEPGAGAENLDNKPTYMNMHGAPSRSISETISSSGIISATCTDNLLDAVISRAQSASAGKQNSDDMSCRTTVTRTSTSSTPPSPACKQVLFDVPKTGDKIGSAETSSAKNTSIYGSQLSSWIENGSSVKCENSVSTGYSKKPDEGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDSLLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLSPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMETRNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAVDNMMAYHSFPQATQIPATGMPTSLQ 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01448 907 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 907 - -
Aip03g01448 907 MobiDBLite consensus disorder prediction 598 628 - -
Aip03g01448 907 CDD bHLH_AtLHW_like 699 768 - -
Aip03g01448 907 MobiDBLite consensus disorder prediction 598 630 - -
Aip03g01448 907 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 170 IPR025610 -
Aip03g01448 907 MobiDBLite consensus disorder prediction 675 709 - -
Aip03g01448 907 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 695 744 IPR011598 GO:0046983
Aip03g01448 907 MobiDBLite consensus disorder prediction 685 709 - -
Aip03g01448 907 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 907 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01448 Aip-Chr3 15429651 15434706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01448 518 892 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 55.959 1.51e-117 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01448 - - aip:107629784 1795.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00698 08 6577844 6591578 Aip03g01448 03 15429651 15434706 PCT