Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01440 ATGTCCTCCAAGGACTGCGGCCACCACGAAGACGAGAGCCGCAAGCTCATCCGCCTCATCCTATTCGGCGTCGGCGGCTTCTTCTTCGTAGTCCTCCTCACAATATTCATCATATGGGCCGTCCTCAGGCCCACCAAGCCCAAATTCACAATCCAAGACGCCACACTATACGCCTTCAACCTCTCCTCCCCCGCCACCAACACCCTCACCATCACCATGCAAGTCACCCTCTCTTCCCACAACCCCAACCGCCGCATCGGAATCTACTATTCCAACCTCCACGCTTACGCCTCCTACCATAACCAACAGGTAACACTTGCGACCGAGCTTCCCCCAACGTACCAGGGACACAAAGATTTCACCGTTTGGTCACCGTTTCTTTTCGGCGCCGCAGCGCCGGTGTCGCCGTTTACGTTGAGTTCGTTGCAGCAGGACCGGGGTGCGGGTGCCGTCGTGGTCAACGTCAAGATCTACGGAAGGGTCAAGTGGAAGGTGGGGACTTGGGTCTCTGGAAGGTACCATTTGTTTGTGAATTGCCCGGCGTATATAAGGTTCACCGGCGCCGGTGATCGGAGCGGCAGCGGGATCCAGATTGTGGCTCCGGCGAAGTTTCAGCTCTTGCAGGGTTGCAGTGTTGATGTTTAG 645 0.5674 MSSKDCGHHEDESRKLIRLILFGVGGFFFVVLLTIFIIWAVLRPTKPKFTIQDATLYAFNLSSPATNTLTITMQVTLSSHNPNRRIGIYYSNLHAYASYHNQQVTLATELPPTYQGHKDFTVWSPFLFGAAAPVSPFTLSSLQQDRGAGAVVVNVKIYGRVKWKVGTWVSGRYHLFVNCPAYIRFTGAGDRSGSGIQIVAPAKFQLLQGCSVDV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01440 214 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Aip03g01440 214 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 214 - -
Aip03g01440 214 PANTHER OS05G0367900 PROTEIN 6 214 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01440 Aip-Chr3 15197230 15198190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01440 41 157 SNARE and Associated Proteins AT1G32270 27.119 6.09e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01440 - - gmx:100819285 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00683 08 6420345 6422554 Aip03g01440 03 15197230 15198190 PCT