Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01399 ATGGCCAACACTCCCATTCTCTTTCACTTCTTCAAACTGTTGTTGCTCACTTCCTACTTCATTTTCCCGCCATGTGCATCTCAATCCTTGGAAGCCAAAGCTCTCCTTGAGTTCAAGAACCATTTGAATGACCCCTTGAATTGTTTGGGTTCATGGAATGTATCAGTGTCTCCATGTGAGTTTGTTGGAGTGAACTGTGATGCATTCTCAGGGAAGGTGACAGAAATCTCAGTAGAGAATAAGTCCCTCTCTGGTGTCCTTTTCCCATCAATCTCAGTTCTTCAGAGCCTGCAAGTGTTGTCACTGCCATCGAACATGATCTCTGGAAAGCTTCCAATAGAAATAAATAGATGCACCAACCTAAGAGTGCTGAATTTGACAGGAAATCATATGGTTGGAACCATCCCAGACTTGTCTATGCTGAGGAATCTTCAGGTTCTTGATCTTTCAGCAAATTACTTCACTGGGAGAATCCCAAGCTGGGTTGGGAACCTAACTGCCCTTGTGTCACTGGGCCTTGGGGTGAATGAGTTCACTGAGGGTGAGATTCCAGACACACTTGGAAATCTCAAGAACTTGACTTGGTTCTATCTTGGTGGTTCACATTTGATAGGAGAGATTCCTGAATCATTGTATGAAATGAGGGCATTGCAGACACTTGACATTTCAAGGAACAGGATCTCTGGTAAAATTTCCAGATCAATTTCCAAGTTAGAGAATCTGTACAAGCTTGAGCTTTTCTCGAATAACTTGACAGGAACAATCCCAGCTGAGCTTGCAAACCTGACCAATCTGCATGAGGTTGACATGTCTTCAAACCACTTGTTTGGTAAGTTACCAGAGGAAATTGGTAGTATGAAAAACTTGACTGTCTTTCAAGTGTATGGTAACAACTTGTCTGGAGAGCTTCCTGCTGGATTTGGGGAGATGCAGAGTCTTGTTGGGTTCTCAGTTTATAAAAACAGCTTCACCGGGACAATTCCGGAGAATTTTGGCCGTTTTTCACAGCTTGAGAGCATTGACATCTCTGAGAATCAATTCTCAGGTGATTTCCCAAAGTTCTTGTGTGAAGGAAGGAAGTTGGTATTTTTGCTTGCATTGGAAAACAATTTCTCTGGGAATTTTCCCGAGTCTTACGCCTCGTGCAAGTCTCTGTTGAGATTAAGGGTTAGTGGTAACCAATTATCTGGGAAAATTCCAGATGGTGTTTGGGCACTTCCAGATGTAAAAATAATTGATTTGGCTTACAATGATTTCAGTGGTGAGATATCTTCAGAGATTGGGTTTTCTACCAACTTGAGTGAGTTAGATTTGACACAGAACAAGTTTTCTGGTAAGCTGCCATCAGAACTTGGCAATCTGGTGAACCTTGAGAAGCTTTACTTGATCAATAATACTTTCTCTGGTGAAATACCACCTGAAATGGGATCACTGAAGCAACTCTCTACTTTGCATCTGGAACAGAATTCCTTAACTGGACCAATACCTGCAGAATTGGGTGATTGTGCAAGGCTAGTAGACTTGAATCTTGCATGGAATTCTCTCTCCGGAAACATACCCCAGTCAATTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGAAACAGACTTTCCGGTTCTATTCCGGATAATTTAGAGACATTGAAACTGAGCTCTGTGGATTTTTCTCAAAACCTGTTTTCTGGGAGGATCCCATCTGGTCTTCTGATTATTGGAGGAGAGCAAGCTTTTCTTGGGAACAAGGGACTTTGTGTTGAGGAAAATTTTAGACCTCCCATGAATCCTGATTTGAGAATCTGTGCTGAAAGTCATGGTCAGAAAAGGCTTTTTGCTGATAAATTTGTCTTGTTCTTTCTCATTGCTTCTATTTTTGTCATTGCTTTAGCTGTGTTGCTGCTTTTGAATCGTGGAAACCTCAAGCATATTATTGCGGATAAGAACTTGAATGGTCAAGATGAATCAAGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATCGATGCAGATGAAATATGCAAATTGAACGATGATAATTTAATTGGAAGTGGCAGTACAGGGAGGGTTTATCGAGTGGAGTTGCGAAAGAGTCATGCCACAGTTGCTGTAAAGAAACTAGGCAAAGGTGATAATGTGAAGATTTTAGCTGCAGAGATGGAGATTCTGGGGAAAATTAGACATAGGAATATACTTAAGCTCTATGCTTGTTTAGTAAAAGGAGGGTCCAATTTTTTGGTGTTTGAGTACATGCCAAACGGTAATCTTTTTCGTGCTCTACACAGAGATATTAAAGATGGGAAGCGGGAGTTGGATTGGAACCAGAGGTATAAGATTGCTCTGGGAGCCGCAAAGGGAATTTCCTATTTACACCATGATTGTTCTCCACCTATTATTCATAGGGATATAAAATCCAGCAACATCTTGCTTGATCAGGATTATGAGCCCAAAATAGCTGATTTTGGTTTTGCAAGGTTGGCAGAAAAATCCGGTGACCAATTGGGTTATAGCTGTGTTGCTGGTACACATGGTTATATAGCACCAGAACTTGCTTATACACTTGACATAGATGAAAAGAGTGATGTTTACAGCTTCGGAGTGGTGCTATTAGAATTGGTTTCAGGCAGAGAACCGATTGAAGAGGATTATGGAGAGGCAAAGGACATCGTATACTGGGTTTTGACTCATCTGAATGACAGAGAAAGTGTTGTTAACATCCTTGATAACAAGTTGGTATCCAAGTCTGAAAACAATATGATAAAAGTGTTGAAGATTGCTATAAAGTGTACAACTAAGCTTCCATCTCTGCGCCCAACAATGAGAGAGGTTGTCAACATGCTCACTGATGCTGAGCCTTGCACATTGAAATCTCCTCTCAAAGATGAACAAGAGGCTCCTTTGACAAGTGATTTTCTTTAG 2925 0.4092 MANTPILFHFFKLLLLTSYFIFPPCASQSLEAKALLEFKNHLNDPLNCLGSWNVSVSPCEFVGVNCDAFSGKVTEISVENKSLSGVLFPSISVLQSLQVLSLPSNMISGKLPIEINRCTNLRVLNLTGNHMVGTIPDLSMLRNLQVLDLSANYFTGRIPSWVGNLTALVSLGLGVNEFTEGEIPDTLGNLKNLTWFYLGGSHLIGEIPESLYEMRALQTLDISRNRISGKISRSISKLENLYKLELFSNNLTGTIPAELANLTNLHEVDMSSNHLFGKLPEEIGSMKNLTVFQVYGNNLSGELPAGFGEMQSLVGFSVYKNSFTGTIPENFGRFSQLESIDISENQFSGDFPKFLCEGRKLVFLLALENNFSGNFPESYASCKSLLRLRVSGNQLSGKIPDGVWALPDVKIIDLAYNDFSGEISSEIGFSTNLSELDLTQNKFSGKLPSELGNLVNLEKLYLINNTFSGEIPPEMGSLKQLSTLHLEQNSLTGPIPAELGDCARLVDLNLAWNSLSGNIPQSISLMSSLNSLNLSGNRLSGSIPDNLETLKLSSVDFSQNLFSGRIPSGLLIIGGEQAFLGNKGLCVEENFRPPMNPDLRICAESHGQKRLFADKFVLFFLIASIFVIALAVLLLLNRGNLKHIIADKNLNGQDESSQKWKLASFHQVDIDADEICKLNDDNLIGSGSTGRVYRVELRKSHATVAVKKLGKGDNVKILAAEMEILGKIRHRNILKLYACLVKGGSNFLVFEYMPNGNLFRALHRDIKDGKRELDWNQRYKIALGAAKGISYLHHDCSPPIIHRDIKSSNILLDQDYEPKIADFGFARLAEKSGDQLGYSCVAGTHGYIAPELAYTLDIDEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTHLNDRESVVNILDNKLVSKSENNMIKVLKIAIKCTTKLPSLRPTMREVVNMLTDAEPCTLKSPLKDEQEAPLTSDFL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01399 974 Pfam Leucine rich repeat 216 275 IPR001611 GO:0005515
Aip03g01399 974 Gene3D Transferase(Phosphotransferase) domain 1 757 966 - -
Aip03g01399 974 SMART serkin_6 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01399 974 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 962 - -
Aip03g01399 974 SUPERFAMILY RNI-like 244 568 - -
Aip03g01399 974 ProSitePatterns Protein kinases ATP-binding region signature. 684 708 IPR017441 GO:0005524
Aip03g01399 974 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Aip03g01399 974 ProSiteProfiles Leucine-rich repeat profile. 528 551 IPR001611 GO:0005515
Aip03g01399 974 Gene3D Ribonuclease Inhibitor 314 595 IPR032675 -
Aip03g01399 974 Gene3D Ribonuclease Inhibitor 28 180 IPR032675 -
Aip03g01399 974 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 9 962 - -
Aip03g01399 974 ProSiteProfiles Protein kinase domain profile. 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01399 974 SMART LRR_typ_2 94 118 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 526 550 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 478 502 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 214 238 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 454 477 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 262 286 IPR003591 -
Aip03g01399 974 SMART LRR_typ_2 141 165 IPR003591 -
Aip03g01399 974 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Aip03g01399 974 Gene3D Ribonuclease Inhibitor 181 237 IPR032675 -
Aip03g01399 974 CDD STKc_IRAK 684 950 - -
Aip03g01399 974 Pfam Protein kinase domain 680 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01399 974 Gene3D Ribonuclease Inhibitor 238 313 IPR032675 -
Aip03g01399 974 SUPERFAMILY L domain-like 47 313 - -
Aip03g01399 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Aip03g01399 974 SUPERFAMILY Protein kinase-like (PK-like) 677 949 IPR011009 -
Aip03g01399 974 Gene3D Phosphorylase Kinase; domain 1 677 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01399 Aip-Chr3 14595451 14600223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01399 20 959 Receptor kinase-like Gene Family AT1G72180 55.532 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip03g01399 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01399 - - gmx:100789704 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01399 03 14595451 14600223 Aip03g01399 03 14595451 14600223 ECH