Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01387 ATGGGTTCTTCTAATAACGGTGGTGTGCCACCGGGGTTTCGATTTCATCCAACCGATGAGGAATTGCTTCATTACTACTTGAAGAAGAAGGTGTCGTTTCAGAAGTTTGACATGGATGTTATTAGAGAGGTCGACCTCAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGCAGAATAGGGTCAACACCACAAAACGAGTGGTATTTCTTCAGCCACAAGGATAGAAAGTACCCAACAGGGTCAAGGACAAACCGAGCAACGAACGCAGGGTTCTGGAAAGCGACGGGAAGAGACAAGTGCATAAGGAACACCTACAAGAAGATTGGGATGAGAAAGACACTTGTGTTCTACAAAGGTAGAGCCCCTCATGGCCAGAAGACTGATTGGATAATGCACGAGTACCGCCTTGAAGATTCCAATGATCCACAAGCAAATGCCAACGAAGATGGGTGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTCAAGATTGGAAATGAAGGAGGTGGTGGCTCCACACACACCTCATCGGACCAGCAACTCAACAACTCAACGGCCACCAATGCTCGTTCCTTCATGCAAAGGGAAAACCACTACCTACTGCAAAACCCTAGGAATGGGAACCCATCCTCTTCATCCTCAGGCTTTGATGAACTCGATAAACCCGAGCTCGGTCTCCATCACTATCCTCACATGCAAACCCCACACTATTCACTCTTCCATCACTCCCAACCACTTCTTCATCCCCAGGCCCACAAGCCCATCGTCTATGACTACTCTTATGCACCCGCCCTTCCTTCAGACCCTCCTGTCATCGCTAAGCAGCTCATGACTAACCCTAGAGACTGCGATAGCGGTGGCAGCGAGGGTCTGAGGTACCAGCAGGTTTCCGAGCCTGGTATGGAGGTTGGATCATGTGAACAAGCCCAGGAAATGGGCGCCGCAAGAGGAGGAGGAGAAGGAATGAATGAATGGGGTGTGCTTGATAGGCTTGTAACCGGGAACCTTGGAAATGAAGATTCAGCCAACAAAGGGATTAGGTTTGAAGATGCAAATCCACATCAGATTAACCAGCTTTCTTTGAGGGGAGAGATGGATTTCTGGGGCTATGGGAAACAATAA 1128 0.4876 MGSSNNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDSNDPQANANEDGWVVCRVFKKKNLFKIGNEGGGGSTHTSSDQQLNNSTATNARSFMQRENHYLLQNPRNGNPSSSSSGFDELDKPELGLHHYPHMQTPHYSLFHHSQPLLHPQAHKPIVYDYSYAPALPSDPPVIAKQLMTNPRDCDSGGSEGLRYQQVSEPGMEVGSCEQAQEMGAARGGGEGMNEWGVLDRLVTGNLGNEDSANKGIRFEDANPHQINQLSLRGEMDFWGYGKQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01387 375 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Aip03g01387 375 MobiDBLite consensus disorder prediction 203 219 - -
Aip03g01387 375 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Aip03g01387 375 PANTHER PROTEIN BEARSKIN2-LIKE 5 254 IPR033519 -
Aip03g01387 375 MobiDBLite consensus disorder prediction 203 225 - -
Aip03g01387 375 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Aip03g01387 375 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 254 - -
Aip03g01387 375 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01387 Aip-Chr3 14388756 14390699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01387 3 371 NAC Transcription Factor Family AT1G33280 52.646 2.33e-123 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g01387 NAM 2.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01387 - - adu:107477630 759.599