Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01380 ATGACGTCAACACCTACGCCACCACGCCACGCCGAACCCTCCTCCTCTTCCTCTTCCTCTTCCGCCAAGTTCAGGCTTCAGAAGATTCCTCCGATTCCGTTCCGAAGGAAGTCCAAATCTAAGGCCGAAGCAAACAGATTGGCCGAGGAAGAACATAAAAAGCAGCAGCAGAAGCTGCAGCAGGAGAAGCAAGAACAACAACAAAAACAAAAACAAAGCAAGGTGCAGAAAGACATGCAGGATTGCGATTCCGGAGAACCCTCCATTCTTCTCGCGTCTTCTTTAGGGCTTAATCAAATTCGCACTCGCTCTTCTTCTTCCCCTCTCCGCCATTGCTCCTCCGTTGGCGCCTCTTCCTTTCTCACAAACGACGTCGTCTCAAACATTGACCACATTCCTACAACCAAACCTACTAAGGAACCATTTCCTAATTGTTGTTGTTTAGGGGAGAAAGTTCATTGGAGTCAATCCAAATCGTTGAAGGCTCATTCTCAGCTGCTTCCTGTTCTGGAGGGTAATCATGCAGCTTTTGCCAAAGAAATGAATTCCCCACGTTTTCAGGCAATCCTGCGTGCAACAAGTGGCCGCAGAAGGACACAACCTGATATCAAAAGCTTTTCCCATGAACTCAACTCCAAAGGTGTTCGACCTTTTCCAATTTGGAAACACCGTGCATTAGGCCATATGGAGGAAGTCATGGTGGCAATTAGAGTTAAGTTCGAAAAATTGAAGGAAGAAGTTGATTCGGACTTGGGTGCTTTTGCCGGAGATTTGGTGGGTATTCTTGAAAAAATTTCAGGGTCTCATCCTGAATGGGCAGAGAGCTTGGAGGATCTCTTGATTGTTGCTCGACAATGTTCAAAGATGTCAGCTACCGAGTTTTGGGTCAAATGTGAAACTATTGTTCAAAATTTAGATGACAAACGTCAAGATTTACCTGTGGGGATCCTCAAGCAAGCTCACACACGCCTACTTTTTATCCTCACTCGTTGCACCCGTCTTGTGCAATTCCACAAGGAAAGTGGCTATGAACAAGATCACATTCTGGGTCTTCACCAGCTCAGCGATCTTGGTGTATATCCAGAGGAGCTGTTGCAGGCTGCACAACAAAATGCTGATGCTCCAATTGGTGGACATGACATGGCTGACCTGCGGAAAAAGTCAAAAGGAAAAGAGAAAAACAAATCAAAGACTACGAAATCTCAAGCTAACGAACAAAGAGTTATGAGTGGCAATGCGGAGGAGGATAGTACAACAAAAAATAGTTCCACTCCAAATAGCTATAGGATGGCTTCTTGGAAAAGGTTTCCAGCAGCTATTGACAAAAAGCAAAAGGATGAAGATGATGGAGATTTCCCCTCAAAAGGTGATATGGATCATTCGCTGGTCAAAGAACAGAATTCTGAAAATTTGGATGCTATGTCATGTCAACCTGAACATTCTGTGTCATCGTCAAGGACACGAAAGGGTTCTTGGGGATTCTGGGGAGATCAACAAAATCTAACATATGAAGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGTTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGATACTATTGAAAAGATATTGGAATCCTGGACACCTAAAAGCACCCAAAGTACCGAAATTGCAGGAGACAGTTTTGAGGTTTCTAGAATGTCTACATCAAGTGTGCATGAAGAGTTCAGTGAGTTAACTCTAGAAAGAAATAACATCTCTTCTAGATGCTCTGAAGACATGCTTGACTCTACCAATGAAACTGACAATACATTTGTTATGGATGATGTGCACCTCCCATCCGAAATATCGTGTGAACCGCATATCTATTTAAAATCTGATCATGGGACAAAAATATCTTCAACTGGAAGCTTGACACCAAGATCCCCTTTGATAACACCACGAACCAGTCAGATAGAAGTGTTATTAAGTGGAAGAATAGCAATATCTGAATATGAGAGTTACGACCAGATTAATAAGCTAGTGGAAATAGCTCGTTCTGTTGCAAATGTGAATGCCTGTGACTACAGTTCTTTGGAGATTATGCTTGATCGCTTAGAAGACCTGAAATATGCAATTCAAGACAGAAAAGTGGATGGCCTCATTCTGGAGACTTTTGGACGACGTATAGAGAAACTTCTACAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTAGACTCGTCAAATATCATGGCTGAAGAAGAGAGTGCAGTGGAAGATGAAGTTGTACGTAGCCTTCGTGCTAGTCCAATTAATCCTTGTTCCAAGGACCGAACCTCTATAGAAGACTTTGAAATAATAAAGCCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTGCCCGGAAAAGGGCAACTGGTGATTTATTTGCTATAAAGGTTTTGAAAAAGGCAGATATGATACGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGCGAGACATCCTCATATCTGTTCGAAATCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGAGAAAATCTCTATCTGGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTCTGTTAAGAAATTTAGGTTGCTTAGATGAAGATATGGCTCGTGTCTATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATACCTTAAATGTGATTCACAGAGATTTGAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCACATTAAGTTGACTGATTTTGGACTCTCTAAAGTTGGTCTTATCAACAGCACAGATGACTTATCAGCACAATCATTTTACAATAATGGTTTTCTAAGAGATGATGAACTAAAACCTCAACATTATTCTAAAAGGGAAGGACGTCGAAAGCATTCAATAGTTGGCACCCCAGATTATTTGGCACCAGAAATACTTCTTGGGATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTGATTCTTTATGAGCTTATTGTGGGTATTCCACCATTCAATGCAGAACATCCCCAGCAAATTTTTGATAACATAATCAACAGAGATATACAATGGCCCAAGGTTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATTAACAAATTATTGAATGAAAATCCAGTCCAAAGGTTAGGTGCAACAGGAGCTACAGAGGTTAAACGCCACTCGTTCTTCAAGGATATTAATTGGGATACTTTAGCAAGGCAGAAGGCTATGTTCATACCATCAGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCAGAGGATGAACATTGTACTGGGGGTAGTGACTTTGATGACATTAGTGAAACAAGCAGCACCTCTGGCAGTGACTTATTAGATGAAGATGGTGATCAATGTGGTAGTTTGGCAGAATTCAGTGCTCCTCCTCTTGAGGTGCAATACTCCTTTAGCAATTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAATTATGATCTGGTGATTAAGAACTCCAAAGAATCGCCCGATAACTCCAATCCATCAGTTTCATGA 3609 0.4126 MTSTPTPPRHAEPSSSSSSSSAKFRLQKIPPIPFRRKSKSKAEANRLAEEEHKKQQQKLQQEKQEQQQKQKQSKVQKDMQDCDSGEPSILLASSLGLNQIRTRSSSSPLRHCSSVGASSFLTNDVVSNIDHIPTTKPTKEPFPNCCCLGEKVHWSQSKSLKAHSQLLPVLEGNHAAFAKEMNSPRFQAILRATSGRRRTQPDIKSFSHELNSKGVRPFPIWKHRALGHMEEVMVAIRVKFEKLKEEVDSDLGAFAGDLVGILEKISGSHPEWAESLEDLLIVARQCSKMSATEFWVKCETIVQNLDDKRQDLPVGILKQAHTRLLFILTRCTRLVQFHKESGYEQDHILGLHQLSDLGVYPEELLQAAQQNADAPIGGHDMADLRKKSKGKEKNKSKTTKSQANEQRVMSGNAEEDSTTKNSSTPNSYRMASWKRFPAAIDKKQKDEDDGDFPSKGDMDHSLVKEQNSENLDAMSCQPEHSVSSSRTRKGSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIVDRCDLKGLTVNERLERVSDTIEKILESWTPKSTQSTEIAGDSFEVSRMSTSSVHEEFSELTLERNNISSRCSEDMLDSTNETDNTFVMDDVHLPSEISCEPHIYLKSDHGTKISSTGSLTPRSPLITPRTSQIEVLLSGRIAISEYESYDQINKLVEIARSVANVNACDYSSLEIMLDRLEDLKYAIQDRKVDGLILETFGRRIEKLLQEKYISLCGQIEDEKVDSSNIMAEEESAVEDEVVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHTLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAQSFYNNGFLRDDELKPQHYSKREGRRKHSIVGTPDYLAPEILLGMGHGATADWWSVGVILYELIVGIPPFNAEHPQQIFDNIINRDIQWPKVPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHSFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCTGGSDFDDISETSSTSGSDLLDEDGDQCGSLAEFSAPPLEVQYSFSNFSFKNLSQLASINYDLVIKNSKESPDNSNPSVS 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01380 1202 ProSiteProfiles AGC-kinase C-terminal domain profile. 1083 1182 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip03g01380 1202 Coils Coil 44 76 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 467 489 - -
Aip03g01380 1202 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 21 1201 - -
Aip03g01380 1202 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 1201 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 1 88 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 372 489 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 401 430 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 379 400 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 1128 1143 - -
Aip03g01380 1202 Gene3D Transferase(Phosphotransferase) domain 1 878 1100 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 436 466 - -
Aip03g01380 1202 MobiDBLite consensus disorder prediction 36 81 - -
Aip03g01380 1202 ProSiteProfiles Protein kinase domain profile. 794 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01380 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Aip03g01380 1202 MobiDBLite consensus disorder prediction 1124 1144 - -
Aip03g01380 1202 Pfam Protein kinase domain 794 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01380 1202 Gene3D Phosphorylase Kinase; domain 1 792 1109 - -
Aip03g01380 1202 CDD STKc_MAST_like 800 1087 - -
Aip03g01380 1202 SUPERFAMILY Protein kinase-like (PK-like) 791 1110 IPR011009 -
Aip03g01380 1202 SMART serkin_6 794 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01380 Aip-Chr3 14214045 14221342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01380 2 1201 AGC Kinase Gene Family AT5G62310 61.002 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Aip03g01380 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01380 - - gmx:100817975 1762.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01380 03 14214045 14221342 Aip03g01380 03 14214045 14221342 ECH