Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01377 ATGTTGAGAATACTTGTATCCATTGCATTAATCTCAACCCTTGTTCATACATCATCTTCAAGTTACTCTCCCGCCACACAAAAATCCATAAACACATACAAGAAATTCATAAAGGATGAGTGCAATTCAACCACATACCCTAATTTCTGTTACAACTACTTGTCACACTACGCGTGGCAAGTCAAAACAAACCGCGTCACACTCACAAAAGTAGCCGTTAACATAACGGTAATGATTGCGAAGAGCTCGTTCAAAACGCTGACAAAACTATCCAAATCGACGAGCCTAACAAAAGCGGAGAGTTCGGTGCTGGCGGATTGCCGGGATAACATAGACGACACGGTGGACCGGCTGCAGCAGTCTGCAAAGCAGTTGGCGCGGCTGAACGGAACGAGGACGGTGGAGGAGAGGTTTGAATGGGATAGCATAAAGACATGGATGAGTGCTGCAATTACGGATGAGTACACTTGTACGGATGGAATCGGTGAAATGAAAGTGAGGGTTCCATTGCAGAAGAAGATCCAATCCAGTATTGCTAATGTTGCTTGGATGAATAGCAATGCTCTCGCTCTTGTTAACAAGATTTCTTACTAG 594 0.4428 MLRILVSIALISTLVHTSSSSYSPATQKSINTYKKFIKDECNSTTYPNFCYNYLSHYAWQVKTNRVTLTKVAVNITVMIAKSSFKTLTKLSKSTSLTKAESSVLADCRDNIDDTVDRLQQSAKQLARLNGTRTVEERFEWDSIKTWMSAAITDEYTCTDGIGEMKVRVPLQKKIQSSIANVAWMNSNALALVNKISY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01377 197 CDD PMEI-like_3 41 196 - -
Aip03g01377 197 SMART PMEI_2 32 191 IPR006501 GO:0004857
Aip03g01377 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 193 - -
Aip03g01377 197 Coils Coil 108 128 - -
Aip03g01377 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 196 IPR035513 -
Aip03g01377 197 Pfam Plant invertase/pectin methylesterase inhibitor 35 191 IPR006501 GO:0004857
Aip03g01377 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 195 IPR006501 GO:0004857
Aip03g01377 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 195 IPR035513 -
Aip03g01377 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 2 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01377 Aip-Chr3 14199186 14199973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01377 37 196 Carbohydrate Esterase AT1G53830 28.571 1.97e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01377 - - gmx:100527377 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01377 03 14199186 14199973 Aip03g01377 03 14199186 14199973 ECH