Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01376 ATGGATGTGAATGTTGTTTTTCCACGCTCATCAGCTACCATGTATTACCCTGTCTTATTATTATTAGTTCTTCTCTCTATATCCAAATCTTCTTCTTCTGTTTCTTCTTCTTCTACCAATAATTACCAAAACACCCCTAATAATACACAAACGTATTACTACAAAAGCTACATAAAAAGCTCATGCAACACAACAACATACCCTTCAATTTGCTACAAGAATCTCAACCGTTATGCTTTGTCCATACAAGCAGATCCTTTTCTGCTCTGCAACACTTCACTCGGCCTCGCCTTTAAGGCGGCTCGCTCCGCCTCCACCACCGTCTCCAAGATCCTCAAGAACAATAGTAGCAGCCTCACGACGCCGGCCAAAGCCGTGGTTCGTGACTGCTACGGCAACCTCAAAGATTCGGTTGAGCAGATAAAAGATTCTATTTCTGAAATGGGGAACTTGTATGAGAGTAGCGACAAAGATTTCAAGATGAGTAACATAAAGACATGGGTGAGTGCTGCTATAACGAATTATAATACGTGTTCGGATGGATTTGAAGAACAGAGTGTGGATGGTGATGTTAGAAATAAGATCAATAAGCTTGTTTTGAATGCTGCGAGGATGACTAGTAATGCATTGATTTTTGAGGATAGCTTTTCCTCCGACTACGACCTCAAATCCATCACAAGCAAGGCAATATATACTGCCGCCCCTGTCAGTGTTGATTCTCTATCTCCTTCCTCCAAGCACGTGAAACCCTTGCCTGCCGAATCGTCCTCCTCAACTCAGTCACTCGTCCTGGTTGACTCGCAGGAAAATGGGATCCGACTCGTCCACACACATGGCGTGCGCGGAGGCAGTTTATCAGAACAACTTATCTCTTGCGGAGGCGCTCTAAAGCAGATCGAGTTCTTAGAGCCATGCGTAAACTTGGAGGATCTTGACATCTCGATGCTGGAGCTGAGGTTTAAAGACGAAGATGGAGAAGGTGAGGGATGGGCTACTGTGTGGTTGCGGTTGGGGAGGCGACAATACAAGTGGTTGAGATTGGCGACAATGATAAAGATGAGGGTGATGACTGGTGGTTGTTGGAAAGGGAATAAGATAGAGAATGATGGTAGTAATGGTGGAAGAAAGGTAACTTAG 1137 0.445 MDVNVVFPRSSATMYYPVLLLLVLLSISKSSSSVSSSSTNNYQNTPNNTQTYYYKSYIKSSCNTTTYPSICYKNLNRYALSIQADPFLLCNTSLGLAFKAARSASTTVSKILKNNSSSLTTPAKAVVRDCYGNLKDSVEQIKDSISEMGNLYESSDKDFKMSNIKTWVSAAITNYNTCSDGFEEQSVDGDVRNKINKLVLNAARMTSNALIFEDSFSSDYDLKSITSKAIYTAAPVSVDSLSPSSKHVKPLPAESSSSTQSLVLVDSQENGIRLVHTHGVRGGSLSEQLISCGGALKQIEFLEPCVNLEDLDISMLELRFKDEDGEGEGWATVWLRLGRRQYKWLRLATMIKMRVMTGGCWKGNKIENDGSNGGRKVT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01376 378 Pfam Plant invertase/pectin methylesterase inhibitor 57 210 IPR006501 GO:0004857
Aip03g01376 378 PANTHER PECTINESTERASE INHIBITOR 4 13 213 - -
Aip03g01376 378 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 216 IPR035513 -
Aip03g01376 378 CDD PMEI-like_3 60 210 - -
Aip03g01376 378 SMART PMEI_2 53 212 IPR006501 GO:0004857
Aip03g01376 378 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 215 IPR035513 -
Aip03g01376 378 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 213 - -
Aip03g01376 378 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 212 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01376 Aip-Chr3 14193526 14196689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01376 56 233 Carbohydrate Esterase AT3G14310 27.869 4.22e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01376 - - aip:107634201 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01376 03 14193526 14196689 Aip03g01376 03 14193526 14196689 ECH