Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01375 ATGCAGGACTGCATGGAGGTTTTGGCTGATTCCGTGGAGGAGCTCACAAAATCGATTGGAGAAATGAGTCATTTGAGGACAAGTAATTTTGAAGGAACCATGAGTGATGTTCAAACTTGGGTCAGCGCTGCTTTGACCGATGATACCACCTGCACTGATGGCTTCCAACAGACCCCTAGTTCTGTCGCCGGAGATGTTAAGACCGCCGTCCGTGGCCGCATCATCGAGGTGGCGCAACTCACTAGTAATGCCTTGGCTTTGATTAATCAGCTCGCTAATGGCCATCCTTAA 291 0.4948 MQDCMEVLADSVEELTKSIGEMSHLRTSNFEGTMSDVQTWVSAALTDDTTCTDGFQQTPSSVAGDVKTAVRGRIIEVAQLTSNALALINQLANGHP 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01375 96 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 91 IPR006501 GO:0004857
Aip03g01375 96 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 91 IPR035513 -
Aip03g01375 96 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 93 IPR035513 -
Aip03g01375 96 PANTHER 21 KDA PROTEIN-LIKE 1 93 - -
Aip03g01375 96 CDD PMEI-like_3 1 93 - -
Aip03g01375 96 Pfam Plant invertase/pectin methylesterase inhibitor 1 87 IPR006501 GO:0004857
Aip03g01375 96 PANTHER PECTINESTERASE INHIBITOR-LIKE 1 93 - -
Aip03g01375 96 SMART PMEI_2 1 87 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01375 Aip-Chr3 14182847 14183137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01375 4 87 Carbohydrate Esterase AT5G53370 38.095 4.87e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01375 - - gmx:100305537 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01375 03 14182847 14183137 Aip03g01375 03 14182847 14183137 ECH