Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01370 ATGGAGAATGATGGCAAAGAGTCGTATAAGGATGGTGATCAATATGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAGATATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATACTGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAATGCTATAGATTTGTGTCCCGAAAAGACTTGAAGATGGTGGATGCTAATGGCAACATTAATACAAGACAATTGGTTTGCAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGACAATTACTCGTGTCAACTGCAGGGCAAGGATTCGGTTCATTCTTCACTATAGAATGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACGCAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCCGCGAATCGTGGGCTTGATGAGGCCGATAAAACACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTATCTGTTTTCTAAGGCAGACAGTGACCTGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGGTTGGATAATTTGGTGTGGGCTGATGGAGAAAGCGTTGTTGATTACGAATGTTTTGGCGATGTACTGGCTTTTGACACCACTTACAAGAAAAATGTCTACAACAAGCCCTTAGTCATATTTTCAGGGACCAACCACCATGGCCAGACAACTATCTTTGGATGCGCTCTGCTCTCAGATAAAAGGTCCGAAACTTTCAAGTGGGCACTGAAGGAATTTTCAGAAATCATGTCAGAAAACTACCTTGAGGCGTTGTGA 1050 0.4162 MENDGKESYKDGDQYEDLSVEYECSSDESDDMVDVTVDEAEADIINADGFEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYRFVSRKDLKMVDANGNINTRQLVCNKAGERHWKHLKRDNRQREHRTITRVNCRARIRFILHYRMGKWKVSVFESERNHPLCPPKYRHLIAANRGLDEADKTQADSLRACGVKTCHIMGYMVSQKGGYDKVGFTSKDLHNHISKTRRGKVKDGDAFAALAYLFSKADSDLLFLGKFTLKDGRLDNLVWADGESVVDYECFGDVLAFDTTYKKNVYNKPLVIFSGTNHHGQTTIFGCALLSDKRSETFKWALKEFSEIMSENYLEAL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01370 349 PANTHER OS02G0262500 PROTEIN 64 343 - -
Aip03g01370 349 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 343 IPR031052 GO:0006355
Aip03g01370 349 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aip03g01370 349 Pfam MULE transposase domain 286 343 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01370 Aip-Chr3 14082336 14083385 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01370 FAR1 5.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01370 - - aip:110269479 650.973