Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01367 ATGGGTTTGGACGATATTGAGCTTGCAATTGCAGCATACTTGTATGGTGATCTATTGGTAGATAACGATGAGGAGGATATAGTGTTTTCAGATCATACAGCTTACAACGATGTATTCAGGAGTTTGATGCCAGGCAAGCCAATTGTTTCTCTTATGCTAGACTTAGTAGCAGATATAATGAAGATAGAGTTGACCAGAGAAAGTGGTTATTGGTTTTTACCTACAGTTTTTGTGGTGTTTATCCCTGTATCTGAGACTATTGACGAAGGTCATCAATATTGGTACCTCGTAGTGATCAATTGTGTTAAAGGACAAATCATTTTGCTAGACCTATTGCCCACTGAGAAACAGTTCAAGCGAAAGAGGACAGCCTTGAAATTAGCCATTTTTTTAGACGAAGTATTAGAAGACCGTTCATTCTATGACTTTGAGACTACTCCGAATCTGAATTCTTCACAATTTGAATTAGAAGAACCGGAGGGCCTTCCCACCCTCGAACATGGATTGAATGACGCGGGTGTGTGGGTTGCAAGTTGGATGATAGCTTGTTTTGAAGATGATCATTTTAATATAAAGGTTGATGATGGGAATCGAATGAAGATTGTAGTCTCACTCGTGTCGAAGAATCATAACATGATCGCGTATAGGGTCAAAAGAAAAGCCTCTGAAAATCTTAGAAAGCTGAGTTCTAGTGCAACTCTGGTTTTCCCTTTTTTTCTGGGGTTTGAAGTGGAAGTGGGAGTTCGGACATCGGCGATGTCTTTGTTGCTTGCAATGTGTGTGCATTTCCAGTTTGTTGTCCTTGTTATGAATACGAGCAAAAGGATATACCAGTGTTGCCTCCAGTGCAAGACTAGATACAAAAGGGACAAAGGGAGTCCTCAAGTAGATGGAGATGAAGATGTGGATGATGTTGATGATTTGGTGAATGAGTTAAGTTATGGCCAAGGAAAGAGTCCCAATAATGCAATCTCTCAGAGTCTAGGCGCAGCATGGAATGTTGCTAATGTGACAAAAGGATCAACTGGGGTGATATTTGGTCTCGGAACTGCTGGCCTTTCTTCCTGTTGTGATGTAATACTCATTGTAGCCAAAACTCTCCTTCAATGTGTTGAGGTTAAGCCAGGGGATTGCGTTAAAATAGATGAGTTGGAAGTAGCTAATGTCTACATCCACATCTCTCAGGTTGCGCTGGGAGAGGCCTCAAAGAATGAGAAATCTAAGGAACCTGTGGTTGTCTACCTCAAAGTTGGAGTGCAGAAGCTTGTTTTGGGAACTTTGAACAGGGAGGAAATCCCCCAAATACCCTTGGATTTGAACGCACCTGGTAATTTTGGTTCTGATGACTATTCAGAGAGTGATGAGGTAGAGGCTGCATTGAATCTCAAAGATAATGGAAAAGTTGAAACCAAGTCTGAAAAGGTAAAGATTGATGAACCAAAAAAGGATGTGAGTGGTGCCCCAGCAAAGAAAGTCAATGTTGTTGTTCCAAAGAAAGATGAAGAGGACGAGGACTCTGATGATGATGATGACGATGAGTCTGATGATGAGGATGAATCTGGAAGTGAGATGGATGCTGATAGTGATGAGGACGGGAGTGATGAAGATGAAAAGACACCTGTGAAGAAGGTCGACCAGGGCAAGAAGAGACCAAATGTGTCTGCAACAAAAACTCCAGTTCCTGCTGCTAAGAAAGCTAAGAATGTAACTCCTGAAAAGTTTGGTGGCAAGAAAATTGCACATGCACTAACCCCTCACCCCGTGAAGAAAGGTGGAAATCCGAACAGCGCAGGGAAGTTCCAGTCACCTAAAACTGGTTCACAGCAGAGGAAAAAAGGTGGAAAGAAGGGTGGTCGTTGA 1860 0.422 MGLDDIELAIAAYLYGDLLVDNDEEDIVFSDHTAYNDVFRSLMPGKPIVSLMLDLVADIMKIELTRESGYWFLPTVFVVFIPVSETIDEGHQYWYLVVINCVKGQIILLDLLPTEKQFKRKRTALKLAIFLDEVLEDRSFYDFETTPNLNSSQFELEEPEGLPTLEHGLNDAGVWVASWMIACFEDDHFNIKVDDGNRMKIVVSLVSKNHNMIAYRVKRKASENLRKLSSSATLVFPFFLGFEVEVGVRTSAMSLLLAMCVHFQFVVLVMNTSKRIYQCCLQCKTRYKRDKGSPQVDGDEDVDDVDDLVNELSYGQGKSPNNAISQSLGAAWNVANVTKGSTGVIFGLGTAGLSSCCDVILIVAKTLLQCVEVKPGDCVKIDELEVANVYIHISQVALGEASKNEKSKEPVVVYLKVGVQKLVLGTLNREEIPQIPLDLNAPGNFGSDDYSESDEVEAALNLKDNGKVETKSEKVKIDEPKKDVSGAPAKKVNVVVPKKDEEDEDSDDDDDDESDDEDESGSEMDADSDEDGSDEDEKTPVKKVDQGKKRPNVSATKTPVPAAKKAKNVTPEKFGGKKIAHALTPHPVKKGGNPNSAGKFQSPKTGSQQRKKGGKKGGR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01367 619 Pfam Nucleoplasmin-like domain 371 440 IPR041232 -
Aip03g01367 619 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 371 613 - -
Aip03g01367 619 MobiDBLite consensus disorder prediction 501 534 - -
Aip03g01367 619 Pfam Zinc-binding RING-finger 246 305 IPR027934 -
Aip03g01367 619 MobiDBLite consensus disorder prediction 535 550 - -
Aip03g01367 619 Gene3D Nucleoplasmin core domain 365 445 - -
Aip03g01367 619 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 371 613 - -
Aip03g01367 619 MobiDBLite consensus disorder prediction 460 619 - -
Aip03g01367 619 MobiDBLite consensus disorder prediction 460 486 - -
Aip03g01367 619 SUPERFAMILY RING/U-box 277 307 - -
Aip03g01367 619 Gene3D Adenoviral Proteinase; Chain A 28 209 - -
Aip03g01367 619 SUPERFAMILY Cysteine proteinases 28 200 IPR038765 -
Aip03g01367 619 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 310 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01367 Aip-Chr3 14066682 14072010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01367 371 612 C2H2 Transcription Factor Family AT5G03740 30.545 8.93e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01367 - - ahf:112732735 244.202