Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01346 ATGAAGACACCTTTCTTCTTTTCCTTCTCCCTCTTCTTCTTCTTCTTCTTCTACTGCCACACCCTACTTGTCTTCTCTGCTACCACCATACCCCTCCAACTCATCTCTCTACTCTCAATAAAATCATCCCTCATAGACCCTAACAACATCCTCCATGATTGGGACCCTTCTTCATCCTTCTCCTCCAACACCGAAAACCAAGACCACCCTATATGGTGTTCATGGACAGGCATCATTTGCCACTCAAAAACATCACAAATCACCACCTTGGACCTCTCAAACCACAACTTCTCAGGCACAATCTCACCCCAAATCAGGTACCTAACTACCCTCAACCACTTGAACCTAAGTCGGAATGTCTTCAGTGGAACCTTCCAAGCTGCAATCTTTGACCTCAGCGAACTCAGGACTTTGGATATCAGCCACAACTCCTTCAACTCAACGTTCCCACCGGGGATATCTAAGCTCAAGTTCTTGAGAGTCTTAAATGCTTACAGCAACAACTTCATTGGACCTCTCCCACAAGAACTCTCCGTGCTTCGCTTCCTTGAACACCTCAACCTTGGAGGAAGCTACTTCAATGGCACAATCCCACCAAGTTATGGCTCCTTGGCCAGACTCAACTTCTTATACCTCGCCGGGAACTCATTGGTAGGTCCAATTCCACCGCAACTAGGCCACCTCAGACAGCTACAACACATGGAAGTTGGTTACAATCCATTGGAATCAACATTACCAACAGAGTTAGCAATGTTAACAAATCTCAGCTACTTGGACATCTCAAGTACTAACATCACAGGTCCTCTGATTCCAGAACTTGTTGGGAACTTAACAATGCTGGAGACACTGTTGCTGTTCAAGAATAAGTTAACGGGTGAAATCCCAAGAAGCATAGGGAACTTGAAGTTACTGAAAGCTCTTGATTTGTCAGATAACAAACTCACGGGTTCAATTCCGGAAGAAATCTCAATGCTGAAGGAACTCAACTTCTTGGGCTTGGAACTGAACAATCTAACAGGGTCAATTCCACAAACAGTTGGTGACCTTCCAAACTTGAACTTCCTCCTTCTCTTCAACAACTCACTCACCGGAATTCTTCCTCAGAAGCTCGGCTCCAACGGTTTGTTAAAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAACCTCTGCAACGGCAACAACCTCAACAGGCTCATCCTCTTCTATAACCGTTTTAACGACTCGCTTCCGAGTTCACTTGTTAACTGTATCTCCCTCTCCAGGGTTCGCATTCAGAATAACCGCTTCAACGGTCAAATTCCATTAGGTCTTGGTCAACTCCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCACCGGGAGAATTCCCGAGGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATCTCCGGCAACGCGTTTGAGAGCGCGTTGCCGAGCAACATATGGAACTCCACCAGCCTCCAGATCTTCTCCGCTGCGGGTTCCAAGATCACCGGTGAGATTCCCGACTTCGTAGGGTGCAAGAACATATACAGGATCGAGTTGCAGGGGAATTCACTTAACGGAAGCATTCCGTGGGATATTGGAAACTGTGAGAAGCTGATTCAGCTGAATCTGAGTAGAAACTCGCTCACCGGAATCATTCCATGGGAAATCTCAGCGCTGCCTTCGATCACCTACGTGGATCTCTCGCACAACTCGCTCACCGGAACTATTCCTTCGAACTTCAACAACTGCACCACGCTAGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCCGGCCTATGCGGCGGCATGGTCGCGAAGCCATGCGCGGCTGAGACGCTAGGCTCGGAGGACAACCAGGTCGACGGTCGACGACAGCAGCCGAGGAAAACTGCCGGCGCGATCGTGTGGATCGTTGCGGCGGCGTTCGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTACGGCCGCCGTTTCGGTAACGACGGGCAGGAGATGGGACCGTGGAAGTTAACGGCGTTTCAACGACTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCGATGTCTGATAAGATCTTAGGGATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCAGGTGGCGACATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTGCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGCTGTTAGGGTGCTGCAGCAACAGAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTGCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCGCAGGGGATTTGCTACCTTCACCATGATTGTGATCCTGTTATCGTGCATCGTGATCTAAAACCTAGTAATATATTGCTAGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCTAAATTGATCCAGACCGATGAATCCATGTCTGTCATCGCTGGATCATACGGCTACATTGCCCCCGAATACGCCTATACTCTTCAAGTGGATGAAAAGAGTGACATTTACAGCTATGGGGTGGTGTTAATGGAGATCTTAAGTGGAAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAATAGCATTGTTGATTGGGTGAAGTCAAAGATAAAGAGCAAAGATGGGATAGATGATATATTAGATAAGAATGCAGGTTCAGGGTGTTCCTCAGTGAGGGAAGAGATGATACAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGATAGGCCTTCAATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCCAAAAGGAAGTTGCTTGATCTGGATAGTATTGTTATAGGTCGATGTGGCGGCGGCGGGGACAATGTGGTGGTTGGTGGTGGTGAAATTCCTTTGGCACAAAAGGCCACGGCGGAAAGCTAA 3120 0.4859 MKTPFFFSFSLFFFFFFYCHTLLVFSATTIPLQLISLLSIKSSLIDPNNILHDWDPSSSFSSNTENQDHPIWCSWTGIICHSKTSQITTLDLSNHNFSGTISPQIRYLTTLNHLNLSRNVFSGTFQAAIFDLSELRTLDISHNSFNSTFPPGISKLKFLRVLNAYSNNFIGPLPQELSVLRFLEHLNLGGSYFNGTIPPSYGSLARLNFLYLAGNSLVGPIPPQLGHLRQLQHMEVGYNPLESTLPTELAMLTNLSYLDISSTNITGPLIPELVGNLTMLETLLLFKNKLTGEIPRSIGNLKLLKALDLSDNKLTGSIPEEISMLKELNFLGLELNNLTGSIPQTVGDLPNLNFLLLFNNSLTGILPQKLGSNGLLKKVDVSTNFLEGPIPPNLCNGNNLNRLILFYNRFNDSLPSSLVNCISLSRVRIQNNRFNGQIPLGLGQLPNLTFLDISDNEFTGRIPEDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQIFSAAGSKITGEIPDFVGCKNIYRIELQGNSLNGSIPWDIGNCEKLIQLNLSRNSLTGIIPWEISALPSITYVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAETLGSEDNQVDGRRQQPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEMGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKSKDGIDDILDKNAGSGCSSVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDLDSIVIGRCGGGGDNVVVGGGEIPLAQKATAES 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01346 1039 Gene3D Phosphorylase Kinase; domain 1 699 798 - -
Aip03g01346 1039 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515
Aip03g01346 1039 Pfam Leucine rich repeat 86 144 IPR001611 GO:0005515
Aip03g01346 1039 Pfam Protein kinase domain 723 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01346 1039 SUPERFAMILY Protein kinase-like (PK-like) 723 995 IPR011009 -
Aip03g01346 1039 SMART serkin_6 720 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01346 1039 SUPERFAMILY RNI-like 288 625 - -
Aip03g01346 1039 Gene3D Transferase(Phosphotransferase) domain 1 799 1009 - -
Aip03g01346 1039 Gene3D Ribonuclease Inhibitor 347 640 IPR032675 -
Aip03g01346 1039 PRINTS Leucine-rich repeat signature 304 317 - -
Aip03g01346 1039 PRINTS Leucine-rich repeat signature 564 577 - -
Aip03g01346 1039 ProSiteProfiles Leucine-rich repeat profile. 303 325 IPR001611 GO:0005515
Aip03g01346 1039 Gene3D Ribonuclease Inhibitor 197 244 IPR032675 -
Aip03g01346 1039 SMART LRR_typ_2 470 493 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 564 587 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 445 468 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 132 156 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 301 325 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 349 372 IPR003591 -
Aip03g01346 1039 SMART LRR_typ_2 204 228 IPR003591 -
Aip03g01346 1039 Pfam Leucine Rich Repeat 447 468 IPR001611 GO:0005515
Aip03g01346 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Aip03g01346 1039 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Aip03g01346 1039 SUPERFAMILY L domain-like 58 390 - -
Aip03g01346 1039 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 1 1025 - -
Aip03g01346 1039 ProSiteProfiles Protein kinase domain profile. 720 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01346 1039 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Aip03g01346 1039 Gene3D Ribonuclease Inhibitor 245 346 IPR032675 -
Aip03g01346 1039 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01346 Aip-Chr3 13778524 13783305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01346 11 1003 Receptor kinase-like Gene Family AT1G08590 42.717 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip03g01346 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01346 - - adu:107495590 1979.14