Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01345 ATGGAATACACTGGTCATAGCAAGAAATTCTGCATAGAGGATGAGAGCGAATGTTTTGGCGAAGTAGTCAGTTCAGATGCTGATGAATTTGATGTTGAGCAATTGGATCCAAGTGGGCAGGATGACCTGTCGAATTATGGAGATGTATTTGGTCTTACTGCAGCTAAAATAGAGAACAAGGTTTTCAGAACTGAGGAGCGTGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGGTGTACGCAAGGGAGACTATGGGAAGGATGATGACAGAAATGTAATTAGGAGGAGATTCTTTTGCAACAGAGCTGGGTTAAGGGATGAAAAGCACTATAATAGATTAGACAGAAAAAGATGTCATAAGCCTGAGACACGAACGAACTGCCAGGCTAAGTTGTCGATATATCTTGACAAAGAAAGTTCGAACTGGAAGGTCTGGAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCAAAGTTCCGTCGGGTTTCAGGTGCGGCAAAGGATCAGCTAGATGGTATGCAAAGTTATGGGCTACCTACGTCAAAGATACTTGGGTACATGGCAGGGATTGCCGGGGGGTATTCACTATTGGGTTTCACAAAGAAGGATGCTTATAACTACCTTGACCGGACTAAGCGCGCACGGATTGCAGATGGGGATGCAAATTCTGCCATTGTCTATTTGGAGGGAAAGGCTTCTGTGGACCCCATGGCAATGGTGAGGTATAACCTGACTAAGGAGGGTATGTTGGCCaacttgttttgggccgatggaatgagcagagttgattaccaacactttggtgatgtcctcgcgttcgatttgacgtacaaaaagaacaagtaCAGGAGACCGCTTGTAATATTCTCAGGTGCAAACAACCACAAACAGACGACTATCTTTGGGTTCGGGTTAGTGTTGGACGAGACGATTGCTTCGTACAAGTGGATGCTAGAAAATCTCCTTGAGGTGATGTGTAATAAATTTCCATCTGTTGTAGTCATAGACGGCGATGATGCCATTATTGCCGCAGTTACGGAAGTTTTTCCTAGTGCAACCCATCGCCTGTGTGCTTAG 1113 0.4115 MEYTGHSKKFCIEDESECFGEVVSSDADEFDVEQLDPSGQDDLSNYGDVFGLTAAKIENKVFRTEERAYEFYMRFGKCHGFGVRKGDYGKDDDRNVIRRRFFCNRAGLRDEKHYNRLDRKRCHKPETRTNCQAKLSIYLDKESSNWKVWKVILEHNHELVARCMVHLIPKFRRVSGAAKDQLDGMQSYGLPTSKILGYMAGIAGGYSLLGFTKKDAYNYLDRTKRARIADGDANSAIVYLEGKASVDPMAMVRYNLTKEGMLANLFWADGMSRVDYQHFGDVLAFDLTYKKNKYRRPLVIFSGANNHKQTTIFGFGLVLDETIASYKWMLENLLEVMCNKFPSVVVIDGDDAIIAAVTEVFPSATHRLCA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01345 370 PANTHER OS02G0262500 PROTEIN 56 369 - -
Aip03g01345 370 Pfam MULE transposase domain 282 369 IPR018289 -
Aip03g01345 370 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
Aip03g01345 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 369 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01345 Aip-Chr3 13774499 13775611 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01345 FAR1 9.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01345 - - aip:107636226 565.459