Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01342 ATGGAATACACTGGTCATAGCGAGAAATTCTGCACGGAGGATGAAAGCAATTGTGTTGGCGACGTAGTCAGTTCAGATGCTGATGAATTTGATGTTGAGCAATTGGATCCAAGTGGGCAGGATGACTTGTCAGATTATGGAGATATATTTAGTCTTACTGCAGCTGAAATAGAGAACAAGGTTTTTAGAACGGAGGAGTGTACTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTCGGTGTACGCAAGGGAGACTATGGGAAAGATGATGATGGAAATGTAATTAGGAAGAGATTCTTTTACAACAGAGCTGAGTTAAGGGATGAAAAGCACTATAATAGATTAGATAGAAAAAGATGTCATAAGTCCGAGACACGAACGAACTGTCATGCTAAGTTGTCGATATATATTGACAAAGAAAGTTTGAACTGGAAGGTCCGAAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCTAAGTTCCGTCGGGTTTCAGGTGCGGCAAACGATCAGCTAGATGGTATGCAAAGTTATGGGCTACCACTACAAGGGAGGCGGGAATTGGTGGCGATTTTTTTCTTGATTagcagcggttttaaaccgccgcaaaatcaaatgccggcggttcataagaccgccatggatatgggcgccgggattgcgtttggcggcggttttcataaaccgctggtataa 726 0.3526 MEYTGHSEKFCTEDESNCVGDVVSSDADEFDVEQLDPSGQDDLSDYGDIFSLTAAEIENKVFRTEECTYEFYMRFGKCHGFGVRKGDYGKDDDGNVIRKRFFYNRAELRDEKHYNRLDRKRCHKSETRTNCHAKLSIYIDKESLNWKVRKVILEHNHELVARCMVHLIPKFRRVSGAANDQLDGMQSYGLPLQGRRELVAIFFLISSGFKPPQNQMPAVHKTAMDMGAGIAFGGGFHKPLV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01342 241 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 186 IPR031052 GO:0006355
Aip03g01342 241 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
Aip03g01342 241 PANTHER OS12G0160900 PROTEIN 54 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01342 Aip-Chr3 13748464 13749189 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01342 FAR1 5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01342 - - ahf:112737376 354.369