Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01305 ATGGCAGTTGTATTGACCCAATGTTCAGAAAAGTTAGGCTACCTCGTACTTCAATTAGGCAAAAATTTCGTTATGTTTATGGTGATGGTGATTGTATGCAATGCTTTACATTATTTTCTAAAGCCTTATTCACAACCTCGGATCACTTCTGACATATTTGTAGGACTAGTGATGGGGAATGTATCTTTCTTACGCAAATTGTACATGGAATTCAACACAACCTTTGTGTTCATCATAGATTTTGGTATGATGTGTTACATGTTTGCTTTGGGGATAGAAATGGATCCATTCATACTGTTCAAGAAACCAAGTAAGGATGCTCAAGTTGCATATGCAGGAATAATTTGCACTTTCATCATAGCAGGCACCACAACACCATTCCTGCATTACTTTACAGATCAAACCAAGTTGCTAGAATACACATTCTCCCTCTCAACTCTTCTATCTAGCACAGCATCCCCAGTTTTGACTCGTTTAATAACGCGACTCAAGATAGGCAAGTCGGATATTGGGAAGCTTGTGATAGCAACAGGGATGCACTCGGATTTTGTATGCTCCTTGCTTCTTTCGGTTGGCTACATAGCCATGCCATTGGACGCATTTTGCGATGATTATGACGAAAAGAAGCGCCTTAAGAAGGCCATCATAATGGGGTGTGCACTTCTTGGACAGACTGTTTTGACAGCACTGGTTTCACCAATCTTTATGAACTGGGTTGATAATGAAAACCCGGAAGGGAAACCTATGAAAGGTTCACATTTGGTGTTGTCAATTGCAGTTATGGTCATGGCTTGTGCCTCATCAACTATATATGAATATAGTCCAATTCTAAGTGCTTTCATGGCAGGGGTGTGTTTTCCAAGGGAAGGCAGAGTTTCCAAATGGGTTATTGCCAAAATCAACTACTTGTTGACCACTATCTTCTTTCCTATCTTTTTCTTGTGGATGGGTTATGCAGCTGATTTCAGAGAGTTTGAAGCTGGACATCTATTGACTTGGGCAAAATTGTTTACACTTATTCTCATTGCCATTGTCGGCAAGGTTGTTGGAACAGTTATTTTGGGGATGATACTTGGTTTTCGCTGGCCGGAATCGGTTGCAATTGGATTACTCCTAACCACCAAGGGCCATTTTCACATCTTCTTGGCTATCAAAGCGGCAAGTTGTGGTGCCAATACTTCAACTGGCATTACAATGATAATGGCAATATTTTTCACAATAGTGCATACTCCATCAGTGATAGCATACATCATAAAACGTGCCAGGAAACGAGCACCAAATCATCGCATGACACTCCAGTTGCTTGACCCACTACATGAGCTAAGGATACTCTTGTGTGTCCACGGACCTGACAACGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGGCAACACCCCCCGGCATTGTGGTATATGTCGCGGACATGATTGAACTCACTGATCAGATAGCAGCAACAGTAGAGAGAGGCGCAGAAGGACATACAACAACTGTGAAAGATGCTGCGGTCGTGGAAATGAGGGACAAAGTATCCAACTCTTTTCAAGCCTATGTAGATGAGGATAGTGAAGGTATTACTCTCAAAAGAACATTAGCAGTGTCAACAATCACTAACATGGCACAAGACATCTGTGTCTTAGCAGATGAATTGATGATTGCCCTCATTATACTACCATTCCACAGGAACCAACGTCAGGATGGAAAATTGGATATGGGTCACCAGGGATTCAGATATGTGAACAGAAAGTTATTAAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTTAACAGAGGCCTTGGATCAATTGAAAAGATATCAAGAACTCAGGTATCACTGAATGTGGCAGTAATATTCATTGGCGGAAAAGATGATAGGGAAGCACTTGCCTATGCAGGTATGGTAGCACGACATCCAGGAGTGAAACTTACAGTGATCAGATTTCTGGTAGATTCCAGTGCAGAATCCTCAAGATTAGCAGCTTATAGAGTCAACCTTCCAGAGCTGGAGGAAGAAGTGGGACTCGACGACGAATGTTTTGCACAATTCTATGAAAAGCATATAAATGGGGGTCGTATTTCCTACTTAGAGAAGCATCTTGCCAGCGCAGCCGAAACATTCACAACTCTCAGATCATTTGAAGGGCAATACTCTTTAGTCATCGTAGGTAAAGAAGGTGGGATGAACTCTATATTGACAAAAGGGATGGACGATTGGCAACAGTGCCCAGAATTGGGACCAATCGGGGATGTACTTTCAGGACCAGATTTCGCAATGACAGTGTCTGTGTTGGTAATCCAACAACATAGACTCAAAGGAGAACTAGATGGTCTTGACGAGGACTTCTCCATCATGTAG 2361 0.4235 MAVVLTQCSEKLGYLVLQLGKNFVMFMVMVIVCNALHYFLKPYSQPRITSDIFVGLVMGNVSFLRKLYMEFNTTFVFIIDFGMMCYMFALGIEMDPFILFKKPSKDAQVAYAGIICTFIIAGTTTPFLHYFTDQTKLLEYTFSLSTLLSSTASPVLTRLITRLKIGKSDIGKLVIATGMHSDFVCSLLLSVGYIAMPLDAFCDDYDEKKRLKKAIIMGCALLGQTVLTALVSPIFMNWVDNENPEGKPMKGSHLVLSIAVMVMACASSTIYEYSPILSAFMAGVCFPREGRVSKWVIAKINYLLTTIFFPIFFLWMGYAADFREFEAGHLLTWAKLFTLILIAIVGKVVGTVILGMILGFRWPESVAIGLLLTTKGHFHIFLAIKAASCGANTSTGITMIMAIFFTIVHTPSVIAYIIKRARKRAPNHRMTLQLLDPLHELRILLCVHGPDNVPASINFMEISRGATPPGIVVYVADMIELTDQIAATVERGAEGHTTTVKDAAVVEMRDKVSNSFQAYVDEDSEGITLKRTLAVSTITNMAQDICVLADELMIALIILPFHRNQRQDGKLDMGHQGFRYVNRKLLRSAPCSVGILVNRGLGSIEKISRTQVSLNVAVIFIGGKDDREALAYAGMVARHPGVKLTVIRFLVDSSAESSRLAAYRVNLPELEEEVGLDDECFAQFYEKHINGGRISYLEKHLASAAETFTTLRSFEGQYSLVIVGKEGGMNSILTKGMDDWQQCPELGPIGDVLSGPDFAMTVSVLVIQQHRLKGELDGLDEDFSIM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01305 786 PANTHER CATION/H + ANTIPORTER 4 784 - -
Aip03g01305 786 Gene3D - 21 427 IPR038770 -
Aip03g01305 786 PANTHER CATION/H+ EXCHANGER 3 4 784 - -
Aip03g01305 786 Gene3D - 463 739 - -
Aip03g01305 786 Pfam Sodium/hydrogen exchanger family 28 413 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01305 Aip-Chr3 13288570 13291964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01305 24 786 Antiporter Super Family AT3G52080 50.000 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01305 - - gmx:100815945 1145.57