Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01268 ATGCTTTCATCTTCTGCCTCAGTGCCTCTGCTCCCTCAGtgcacacatacaatggattgcatgagaatccaaagctccttgtctcttgagaagaattggaaatatgatgtgtttgtgagttttagaggggagactcgcttcaacttcatcgatcatctttatcttgctctccacagacacggcatagttgccttcagggatgatactaggctccagaaaggaggacctatatcagcagggcttctggaagctattgaaagatcacaggttctgattgtggtcttctctatcaactatgcttcctccacatggtgcttgcaagagctggcaaagatagctgactgcattgaaacacggggacagcgtgttctgccaattttctatgatgtgagtccaactgaggtcagaaggcaacgtggaaattatgaagcagcctttatgaaacatgaagaaagattcaaagatgatgcagagatgatggagcaagtgcgaagatggagggtggctctaatagaagtagctaatctctctggctgggatctgaagaacgataagtcacaactggctgtgattgaaaatattgtcaaattggtaccaagcatagtgagtcccaaaccatcatcaagtctatcggatgatatagttgggatgcattctcctctacaagaattagaaaagcttctacttttggactcagaggatgatgttcgagttgtaggaatttgtggaatgggtggcataggaaagtcaactcttgccaagattttatatgaaaagatctctcatcaatatgatgcttcatgttttgtggaagatgtaagtagaatttacggaggttatggtccacttggtgtacaaaagcaactttgtcaagctttcatggaagaaaatttttcgacatgcaatctttcagtggcaagtaatgtgattcaaactaggttacgccatagaaaggttctgatagttcttgataatgttgatgaggggattcaattggagaagttggctataaaacgggaaaggctaggtagagggagtagaataatcatagtttctagagatgagcatatattgagagagtatggagcggacgacgtttacaaagttccactcttaaatgatgagaatgctctccaattgttttgcagaaaagctttcaaatgtaatcaagttgcaaaagattatgaaagcttgacaaattctgcattaaaatatgctgatggacatccgttagcaatcagagtattgggctcatttttgtttgggcgaaatgtgtcagagtggagtagcgcattgattagattgaaagaaaagccaacagaagagattctggatgtgctacgaatcagttttgatgcacttgaggatatggaaaaggaaatatttcttgatattgcttgtttcttttcaaatgacagtgaagaatacgtgaaagatattttacgtattagaggatttcatcctgatattggtataagaattctcattgataaatcactcataactgttgatggatggaaaatagttatgcacgatctgttgagagagttgggtagaagtattgttcgagaaaaatcaccccacgaaccaagaaagtggagcaggttatggaatcaaaaggatctaagcaatgtcttactagaaaacaagAGTTCCTTTGTGTGTGTCTCGACAATGGAGGACTCAACCAAGGTGCGGTTGGGGATGTGCCCCCACTGTTTCACTATCCTTCGTATGCATGCCGATTATTCTCTCTTTGAATGTGGTGAATGCCATATTGTTCTTGGAGCAAAGCATAAAGGTCTTGTTACCTCGTTGGAGATTGAAGATAGTGCCAGATCAGGAGGTTCCTCATCATGGGGGAGAAAATCAAAGAAAATAAAGAGGAAGGTGCAGAAACAGGAACAGAGGTCTCAAATGGGATATCAAGAAGAGCACAAATTCTCTAAGAGATTGTCTGATTTGGAAAAGCAAGAGAAAGATGAGATGGAGCTTTTAAGAAAGCTCTTGGATGATATAATAGACATGAGATTATCCAATTACGATTATTCTGATGAGGGGAAGTCTAAAAGCAGTTCTAGTTTTGTTAGAACCCATTCAGATCCATCCTTTCTCAAATATTCACAAGGATCACGTGAAACAACCTCAATATCCTACTCTGACTTTTCAAGTTTTAAGGACACCGTCACTCTTGACTCTTCAAGTGAGATTGAGGAAACTGAGTCCAAAGGAAGCAGATTGCCGCTTGCTCCATTATTATCTTCAGATACAACAGAAGCTTTCTCTGGCATGCATAATCAAGTTGAAGCTGATATTATTCCCAAAACTAAACAGAAAAAGGACACACAATCTTCATTTGGTAAAGCTGATATTCCAATCACCCCACAAGCTGATGATGACCTTCCTGTCAAGGTAGAAAATTTGGTGACAGAAGATTTAGATGAACTGCGATCATCTTTTGAAACTTTAAAGGTTTCAACTGTACCACAATTGAAGTCCTTATCATCCAACCTTCACAGCCTGAAAATTGAAGGGTGTGAATCCTTAGAGGCTCTTCCAGATGACTTACTAGCAGGAACAACTGCCCTTAAAGAGTTGTACCTGATAAGTTGTTGTTCACTTAAATCCTTCCCCTACCCTGCTGCTTCCTTGACAACACTTTACATGAGAAACTGCAGGAGAATGAGATTTCTCCCCTCTTCAGAATCAAGAAAGAAGCTTGCCTCTCTCGAACATTTGTTCATAGGGAGCAGCTGTGATTCCCTCACTACCTTGACCTTAGACTCTTTCTGCAAACTCAAAATTCTCTGTATATGGGATTGTCACAATCTTCAATCAGTTAATGTTACCAGAGAGTTTAAGGGTGATCTTGCATCACTTGAGTCTCTAGAGATTAGAGATTGCCCAAGATTGAGGTTTTTACCAGATGGAGCATTGCATACTCCAAATTTAGAATCCATATTGATTTCCAATTGCAAGAATCTTAATGCATTGCCCAGTGGTATGAACTTTCTTACATCCCTCAAGACATTGTTTTTAAACAGATGTCCAGCGATTGAATCTCTCCCACTTGGGGGTCTGCCTTCAAGTTTGATTGTACTCTCCATAGCTTATTGTGATAAACTCATACCTCAAGAGGATTGGGGTCTGTGTAGTCTTGAATCTCTCCGTCGATTTGAGCTTGAAGGTGGATGCATGGGCATGGAGTCATTTCCGAATGAGAAGCTTCCATGCAATATCAACTCTCTGCGCATAAGCACACTAAATAGTCTCAAGAAGCTGAACCACAAGGGATTGCAACACCTGAATGTTCTTCACACACTTGAAATTCATGGTTGCGATATTCTTCGATCCTTGCCGGATCAAGGGCTTCCTTCCTCCCTAATTAATCTGTGTGTCCAAGAATGCCCGTTGTTAACTCCAAGGCTTATACCAAAAAGAGGGAAGGAATGGCACAAAGTGGCTCATATCCCAAACATCCAAATTGATCACCAAATAGTCTCTGCATACTAG 3513 0.2237 MLSSSASVPLLPQCTHTMDCMRIQSSLSLEKNWKYDVFVSFRGETRFNFIDHLYLALHRHGIVAFRDDTRLQKGGPISAGLLEAIERSQVLIVVFSINYASSTWCLQELAKIADCIETRGQRVLPIFYDVSPTEVRRQRGNYEAAFMKHEERFKDDAEMMEQVRRWRVALIEVANLSGWDLKNDKSQLAVIENIVKLVPSIVSPKPSSSLSDDIVGMHSPLQELEKLLLLDSEDDVRVVGICGMGGIGKSTLAKILYEKISHQYDASCFVEDVSRIYGGYGPLGVQKQLCQAFMEENFSTCNLSVASNVIQTRLRHRKVLIVLDNVDEGIQLEKLAIKRERLGRGSRIIIVSRDEHILREYGADDVYKVPLLNDENALQLFCRKAFKCNQVAKDYESLTNSALKYADGHPLAIRVLGSFLFGRNVSEWSSALIRLKEKPTEEILDVLRISFDALEDMEKEIFLDIACFFSNDSEEYVKDILRIRGFHPDIGIRILIDKSLITVDGWKIVMHDLLRELGRSIVREKSPHEPRKWSRLWNQKDLSNVLLENKSSFVCVSTMEDSTKVRLGMCPHCFTILRMHADYSLFECGECHIVLGAKHKGLVTSLEIEDSARSGGSSSWGRKSKKIKRKVQKQEQRSQMGYQEEHKFSKRLSDLEKQEKDEMELLRKLLDDIIDMRLSNYDYSDEGKSKSSSSFVRTHSDPSFLKYSQGSRETTSISYSDFSSFKDTVTLDSSSEIEETESKGSRLPLAPLLSSDTTEAFSGMHNQVEADIIPKTKQKKDTQSSFGKADIPITPQADDDLPVKVENLVTEDLDELRSSFETLKVSTVPQLKSLSSNLHSLKIEGCESLEALPDDLLAGTTALKELYLISCCSLKSFPYPAASLTTLYMRNCRRMRFLPSSESRKKLASLEHLFIGSSCDSLTTLTLDSFCKLKILCIWDCHNLQSVNVTREFKGDLASLESLEIRDCPRLRFLPDGALHTPNLESILISNCKNLNALPSGMNFLTSLKTLFLNRCPAIESLPLGGLPSSLIVLSIAYCDKLIPQEDWGLCSLESLRRFELEGGCMGMESFPNEKLPCNINSLRISTLNSLKKLNHKGLQHLNVLHTLEIHGCDILRSLPDQGLPSSLINLCVQECPLLTPRLIPKRGKEWHKVAHIPNIQIDHQIVSAY 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01268 1170 Gene3D - 29 204 IPR035897 -
Aip03g01268 1170 MobiDBLite consensus disorder prediction 770 792 - -
Aip03g01268 1170 Pfam TIR domain 34 200 IPR000157 GO:0007165
Aip03g01268 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 465 IPR027417 -
Aip03g01268 1170 SUPERFAMILY "Winged helix" DNA-binding domain 442 546 IPR036390 -
Aip03g01268 1170 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 29 559 - -
Aip03g01268 1170 Coils Coil 652 672 - -
Aip03g01268 1170 PRINTS Disease resistance protein signature 238 253 - -
Aip03g01268 1170 PRINTS Disease resistance protein signature 313 327 - -
Aip03g01268 1170 PRINTS Disease resistance protein signature 406 420 - -
Aip03g01268 1170 PRINTS Disease resistance protein signature 955 971 - -
Aip03g01268 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 559 IPR044974 GO:0006952
Aip03g01268 1170 MobiDBLite consensus disorder prediction 683 710 - -
Aip03g01268 1170 MobiDBLite consensus disorder prediction 633 654 - -
Aip03g01268 1170 Gene3D - 371 455 IPR042197 -
Aip03g01268 1170 ProSiteProfiles TIR domain profile. 33 202 IPR000157 GO:0007165
Aip03g01268 1170 SUPERFAMILY L domain-like 826 1151 - -
Aip03g01268 1170 Gene3D - 205 367 IPR027417 -
Aip03g01268 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 179 IPR035897 -
Aip03g01268 1170 SMART till_3 34 176 IPR000157 GO:0007165
Aip03g01268 1170 MobiDBLite consensus disorder prediction 685 710 - -
Aip03g01268 1170 MobiDBLite consensus disorder prediction 612 654 - -
Aip03g01268 1170 Gene3D Ribonuclease Inhibitor 1027 1147 IPR032675 -
Aip03g01268 1170 Gene3D Ribonuclease Inhibitor 882 1026 IPR032675 -
Aip03g01268 1170 Pfam NB-ARC domain 230 441 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01268 Aip-Chr3 12627753 12633721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01268 215 550 WRKY Transcription Factor Family AT5G45050 36.202 4.75e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01268 - - aip:107629657 2238.77