Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01266 ATGAGAGTCCAAAATTTTGCTAGGGCTTTTGCCCCTCTGCTTTCCATCAACGTCGCTCCTTCCTTGGTCCTCCCCCTCCGCAGTAGCTCGCTCTCTGATCCTCTCCCTGCGTCATGGTCGTTCTCTAATCCTTTCTATTCGCGGAATTGCTCGTTCTCCCCTGTATCGTGCTTGTTCTCTGATCGTCGACGCCGCAACACGCTGCCGCCGCCGTTGCTACACTCGGGTCCACCACTTCATTGTTTTCTGTCGCCTCTCTGTTCCTCTATCTTCTTCACCAGCGACTCTGATCTCTATCCTTCTCCCTCCACCTCTGCCTCTGCGACCTACTCCTTTAAGGTTTCAAAGTTCATGTTCTCTCTTTTCTTGTTCTGTAGTTATGTTGCACCGGAGTATGCATGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGTTTTGGGATACTTATTATGGAAATAATTACCGTAAGAAGTCCCGTTGAATATAGTAAAACCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAGCTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAACCTTCCTGAAAAGTCTTCTTCAAAGGCTCTTAAGCTTTGCTCTGTTGGTTGCTCTTAA 633 0.4645 MRVQNFARAFAPLLSINVAPSLVLPLRSSSLSDPLPASWSFSNPFYSRNCSFSPVSCLFSDRRRRNTLPPPLLHSGPPLHCFLSPLCSSIFFTSDSDLYPSPSTSASATYSFKVSKFMFSLFLFCSYVAPEYACTGMLTEKSDVYSFGILIMEIITVRSPVEYSKTQGEVNLIEWLKAMVGNRKSEELIDPNLPEKSSSKALKLCSVGCS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01266 210 Pfam Protein tyrosine and serine/threonine kinase 125 168 IPR001245 GO:0004672|GO:0006468
Aip03g01266 210 Gene3D Transferase(Phosphotransferase) domain 1 77 208 - -
Aip03g01266 210 PANTHER OS01G0323000 PROTEIN 126 204 - -
Aip03g01266 210 SUPERFAMILY Protein kinase-like (PK-like) 118 201 IPR011009 -
Aip03g01266 210 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 126 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01266 Aip-Chr3 12607540 12608681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01266 126 193 Trihelix Transcription Factor Family AT5G38560 45.833 2.34e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip03g01266 PK_Tyr_Ser-Thr 2.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01266 - - ahf:112778339 255.758