Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01247 ATGAAGAAGAGTTGGTTCAGCCTTGTGAAGAGGCTCTTCATATGGGACTCAAATTCCACACAAGACAAGAACAAGGAGAAGAGAAGGAGATGGGTATTTGGAAGGGTAAAGAAGAAGAGGTTGCCTTCAATTGCAGCCCCACCACCGCCACCACCAACAACAACAACAGCAACACTTGTGAGTGAAGCAGAGGAAGAAGAGAGCAAGAAACATGCTTTAACAGTGGCCATTGCCTCAGCTGCTGCTGCTGCTGCTGAGGTTGTAAGGCTCACTGGGGTCCCACAATCTTCCCACAAACCTAAACATAATTCAGAAGAATCTGATGAAACTAGGGATGTTGCTTCTCATTCCATAAGCCAGTGCCAGAGGAATAATATCAAAGAATTTGCAGCCATCAAAATTCAAACTGCATTTAGGGGTTACTTGGCTAAGAAGGCTTTGAGAGCATTAAAGGGAATAGTAAAGCTTCAAGCCATAATTCGTGGCCGAGCAGTAAGGCGCCAAGCCATGAGTACTTTGAAGTGCTTGCAATCCATTGTGAGTATCCAGTCACAGGTCTGTGCAAGGAGACTCAAAATGGTTGAAGGAAGCTGGGATTATTGCACTGAAAATGAAGAGATGCATGATTCAAAAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAAGTGGAGTGACAGCACCTTATTGAAGGAAGAGGTAGATGCCTCTTGCATAATCAAGAAAGAAGCAGTTCATAAGAGAGAAAGAATAAAAGAATACTCATTTAATCACAGAAGGTCAGCAGAATCAGAAAGAAGTAAAGTGAATGGAAGATGGAGGTACTGGCTGGAACAATGGGTGGATACACAGCTTTCAAAGAGCAAAGAGCTTGAAGATTTAGACTCAGTTTTCAGCTCAAATTCAAGAGGTGGTGAAGAATATTATGGAGGAAGACAACTTAAGCTGAGAAACATGCATAGACAACAAAGTCCATTTGAAGGTTTAGATTCTCCAATAGTTTCTTCAAGAAAAGTTTTTACTCATAGGAAGCAGTGTTCAGTGGGAGAAAACCAATCATTCTCAAGCTCTTCTCCGGCGACTCCGGCATACATGGCCGCAACAGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGTAAGGACAGGTCATTTGGACAGTGATAGTAGCTATTCACCATGCAAGAAGAAGCTATCTGTTGTGTCTAATGTTAACAGTGAAGTGCTTAGTAATAATGGTAGAAATGGCAACAAGTTCGGTGGTTGTAATCAACAAAGGTCACCAAGCTTTAAGGGACTTCCATTGCCTATAAAATCAAGCAGGACTATCATAAAGGATCTCAGCATCAATTCAGATTGCTCACTGCCCAATTGGGATAATAGACAAAGTTCCTTTAAATGA 1413 0.4183 MKKSWFSLVKRLFIWDSNSTQDKNKEKRRRWVFGRVKKKRLPSIAAPPPPPPTTTTATLVSEAEEEESKKHALTVAIASAAAAAAEVVRLTGVPQSSHKPKHNSEESDETRDVASHSISQCQRNNIKEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLKMVEGSWDYCTENEEMHDSKDKIIRMDSNSERKWSDSTLLKEEVDASCIIKKEAVHKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSNSRGGEEYYGGRQLKLRNMHRQQSPFEGLDSPIVSSRKVFTHRKQCSVGENQSFSSSSPATPAYMAATESARAKARSTSSPRVRTGHLDSDSSYSPCKKKLSVVSNVNSEVLSNNGRNGNKFGGCNQQRSPSFKGLPLPIKSSRTIIKDLSINSDCSLPNWDNRQSSFK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01247 470 MobiDBLite consensus disorder prediction 91 116 - -
Aip03g01247 470 PANTHER IQ-DOMAIN 5-RELATED 2 455 - -
Aip03g01247 470 Gene3D - 126 178 - -
Aip03g01247 470 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
Aip03g01247 470 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Aip03g01247 470 PANTHER IQ-DOMAIN 11 2 455 - -
Aip03g01247 470 MobiDBLite consensus disorder prediction 411 438 - -
Aip03g01247 470 MobiDBLite consensus disorder prediction 99 113 - -
Aip03g01247 470 MobiDBLite consensus disorder prediction 411 434 - -
Aip03g01247 470 MobiDBLite consensus disorder prediction 350 395 - -
Aip03g01247 470 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Aip03g01247 470 Pfam Protein of unknown function (DUF4005) 351 418 IPR025064 -
Aip03g01247 470 MobiDBLite consensus disorder prediction 373 395 - -
Aip03g01247 470 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01247 Aip-Chr3 12352310 12355499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01247 2 470 IQD Protein Family AT5G13460 45.756 3.46e-110 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01247 - - ahf:112789375 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01247 03 12352310 12355499 Aip03g01247 03 12352310 12355499 ECH