Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01221 ATGATAAAGGAACGCAGAAGTCTCCCAATTCTCATTGATAAGTGTATCACTAATTCAAGCAGTTACGCCAATCAGCCATTCTTTGTTCTTCACAAACCTTCATCCCGAAGAAAAGATAGATCATCAACAGGACAAGGTAAACTGCGAAAAAGAAATGAGCTGTCTTCACCGCAGAACACAAAGAAACAGGAAGGAAGTGTGAACGAAGAATGTGACCACCATTTGTTTAAGCCGCTACAAATTGAAGCATTTAACAGTGTTTGGTCAAGAATCGAGTCCACCATTAAGGATGTTTTGAGAGATCTCAATTCTAGTGCATTTAAAGATATACAACTATGGATTCTGGAGTGCTTCAATGCTGCTAGATTGCATGGAGAACCTAATATCACAGAAGCAACTCGATCCTTTCCTATTCTGAGTAATGCTACTCCTGGTCAACTGTCCACTGCATTGGTCATTACCAGAAATATAGAATTTGTTGATGATATATTGACCTTTGAAGAGCTCGGTCATTTCTTGAAATCCCATGGATGCCATGTAGCCAAGCTTTCTTCAGTGGATTTTTCAATGAAAAACGGAATTGCTGGTTGCTTAAAAGCTTTATTGCGAGAGTTTCCACTGGGTGAAATTGATTCAGCTGATATTTCAATCTTAGCATCATGGTATAGAGAACAAGACAACAACAATAAACCACTAGTGCTTATCATTAGTGATTTGGAAAGGTGTTGCGGATCTGTCTTAACGGAATTTGTCCTGATGTTGAGCGAATGGGTTGTCAAGTTACCAGTCATCTTAATAATTGGAGTTGCAACGACAGTAGATGCCCTAAGAAATGCTCTGCCATCTCGTGCTCTCCAATGCTTATGTTCCTCCAAGTTTATGATTGGAACACCAGATGAGAGAATGGATACAATTGTTGAGGCTGTTCTTGTGAAACATAGCACTACATTTAATATTGGTCATAAAGTGGCACTCTTTCTAAGAAATTACTTCATTAACCAAGATGGGACATTAACATCTTTTATAAGAGCTTTGAAGTTAGCATGTTTGTTACATTTCTCCATGGAACCGGTCTCTCTCATACATGGGCTTATGCTGGCAGAAGACCAAAAGGATTGGATATCTGCATTGTCACCTGAGATTTTGTTGAAATACATGGATGAATTTCCATCATATGATAGGAGTCAAATTGCTAATCAAGCTGGAAAGAGCATTGCCCAGGGTTTGTCAGATTTGATGACAGAGAAAAGGCTATGGAGCACCGCAGTTCTTTGCCTATGTGAAGCTGGAAAATACAGCAAAGTGCGACTGCTGGACTTGTTTTGCGAAGTGCTCAATCCAGATTTGTACCCGCATAGAGATTCCGTTTGTCACATCAGGAATGAAAAAGATCAAGGGTTGTCTTCAACAAATGGCCACAGTCAACAATACTCTTCCGTTCAAACCGGTGGTTTGATTCGCCAAATAGTTCGCAAAGTGAGGGATCTCCCTACAGGAGCGCTTGGTCAACTGATAAAGAGTTGGGAAAAACTTACCGCAGATATTTCCGAGATTCATGATAAATTGAAAACGTTTCAATCTTCAGTAAGATGTGAAGATAGAAGGAGTCCACGCAAGAGTTCCAAGGACATATCCAAGAGATATGGATCGAAAGCTTCATTAGACACTGACAATGAGTCGACAATGTTAAACTTGCAAGCTGTTGCATTTATAGATTGCTTAGTTAGAAATTATATGAGGCCAATCGAATGCATGCCTTTTCATGAAATTTCCTGCTTCAAGAATGTTGAGAAACTTCAAGTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGCTGATCTGTTGGATTCACATAAGATTTTAAGTTGCGGTTGCTGTAACAAAACTGGCAATGCCCTATTGCCATCAAGACAGGATTCCTCAATTCTGTATTCCCTGGCTCAAGAGCACGGAGATCTTATCAATCTTCACGATTGGTTCCAGTCTTTTAGAACAATTCTTCACCAAACAAATAAACGGAAACCAAAGTCAAAGCAGTCACCCCAGCCAAAGAAGAGAAAAGATACAGCTGGATCTGGAGACCAAAATGAAGCATCAATCCAAGCACGCTTTTGCAGAGCAGTTACAGAAATGCAGATTACCGGGCTGCTTAGAATGCCAAGCAAGCGCCGCCCAGATTTTGTACAAAGAGTAGCATTTGGACTTTGA 2211 0.4012 MIKERRSLPILIDKCITNSSSYANQPFFVLHKPSSRRKDRSSTGQGKLRKRNELSSPQNTKKQEGSVNEECDHHLFKPLQIEAFNSVWSRIESTIKDVLRDLNSSAFKDIQLWILECFNAARLHGEPNITEATRSFPILSNATPGQLSTALVITRNIEFVDDILTFEELGHFLKSHGCHVAKLSSVDFSMKNGIAGCLKALLREFPLGEIDSADISILASWYREQDNNNKPLVLIISDLERCCGSVLTEFVLMLSEWVVKLPVILIIGVATTVDALRNALPSRALQCLCSSKFMIGTPDERMDTIVEAVLVKHSTTFNIGHKVALFLRNYFINQDGTLTSFIRALKLACLLHFSMEPVSLIHGLMLAEDQKDWISALSPEILLKYMDEFPSYDRSQIANQAGKSIAQGLSDLMTEKRLWSTAVLCLCEAGKYSKVRLLDLFCEVLNPDLYPHRDSVCHIRNEKDQGLSSTNGHSQQYSSVQTGGLIRQIVRKVRDLPTGALGQLIKSWEKLTADISEIHDKLKTFQSSVRCEDRRSPRKSSKDISKRYGSKASLDTDNESTMLNLQAVAFIDCLVRNYMRPIECMPFHEISCFKNVEKLQVVLIGDPRRRIQADLLDSHKILSCGCCNKTGNALLPSRQDSSILYSLAQEHGDLINLHDWFQSFRTILHQTNKRKPKSKQSPQPKKRKDTAGSGDQNEASIQARFCRAVTEMQITGLLRMPSKRRPDFVQRVAFGL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01221 736 MobiDBLite consensus disorder prediction 533 553 - -
Aip03g01221 736 MobiDBLite consensus disorder prediction 48 64 - -
Aip03g01221 736 MobiDBLite consensus disorder prediction 671 698 - -
Aip03g01221 736 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 29 735 IPR020795 GO:0003677|GO:0005664|GO:0006260
Aip03g01221 736 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 29 735 - -
Aip03g01221 736 MobiDBLite consensus disorder prediction 33 47 - -
Aip03g01221 736 MobiDBLite consensus disorder prediction 33 69 - -
Aip03g01221 736 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 63 203 IPR045667 -
Aip03g01221 736 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 227 360 IPR045667 -
Aip03g01221 736 Pfam Origin recognition complex winged helix C-terminal 608 734 IPR040855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01221 Aip-Chr3 12103330 12112877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01221 18 668 Core DNA Replication Machinery Family AT5G16690 46.526 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01221 K02605 - gmx:100780646 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01221 03 12103330 12112877 Aip03g01221 03 12103330 12112877 ECH