Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01220 ATGGCAGATGGTGTGGTTTCCTTCCTTCTAGAAAACTTGTCCCAGCTGCTGGCAAGTGAAGCCAAGCTACTATGTGGCTTGGAAGGTAGAATCAGATCCCTCCACAGTGAGCTCGAAATTATAAACGTGCTCCTCAAAAGCTTCGAAGGGAAGAGGAACAAGAAGGAGATGGAGCAAGTAGTTGCCAACCAGATCAGAGATGTTGCTCAGGAAGCTGAGGATGTCATCGACACCTTCGTTGCCAACGTGGCCATGCACAAGAGGAGATCCAAGCTAGGGAGAATGTTCCATGGTGTTTCCCACACAAAGCTGCTTCATGATGTTGCTGAGAAAATAGAGAGCATAAAAGCCAATCTTAGTGATATACGTGAGAACAAGATCAAGTATGATGTCTTCCAACAAGAAAGTGAATCATCGTCGACAAGAGAAGATGAGGAGAGGATGCAGTTGTTGCACAAGAGGAGAAGAGATGTGGAGGAACATGATGTAGTTGGTTTCGTCCGGGAATCCAAGACAGTTATCCAGCTGCTTAGTGAAGATGGATCAAGGAGCAATGTTGTCTCCATCATTGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACAGCGATGAGGTGAAGGCATATTTCAATTGTCGTGCATGGGTTTATGTTTCAAATGATTGTAGAGTTAAGGATCTTCTACTTGGCATTCTCAACTGTTTGATGCCTAACCCTGAATATGAGTGTAGTAGCAAAAAGAAGGGAAAAAAGAAAAAGAGCAAAGAGAAACCAAGAGACCTTAATACTTTAAGCGAGGATGAACTGAAGCAAATAGTGCAGGACTGCTTGAAGAAGAAGAGGTATCTACTAGTCCTTGATGACTTGTGGAAAGCTCAAGATTGGGATGAGGTACAAGATGCTTTTCCAAACAATAATAATGGTAGTAAAATACTAATTACGAGTCGTTTGAAAGAGGTGGCTATCCACACTAGTCAAGATCCTCCTTTCTATCTTCAATTACTTACTGATGAAGAAAGTTGGGAACTCTTCTCCAAGAGAGTTTTTCGTGGAGAAGAGTTCCCATTTGATCTAGAGGATCTAGGCAAACAAATAGTCAAAAGTTGTCATGGTTTGCCACTTTCCCTTGTTGTTTTGGCAGGGCTTCTTGCACATAAGGAGAAGTCATACCGAGAATGGTCCAAAGTGGTAGGACATGTTAACTGGTATCTCACTCAAGATGAAACCCAAGTCAAGGACATCGTACTCAAACTCAGTTACGACAACTTGCCCAGAAGATTAAAACCATGTTTCCTGTATCTTGGGATCTTCCCTGAAGACTATGAGATACCTGTTAGGCAACTGCTTGAACTATGGGTTGCTGAGGGATTTATACAACAATCTGGGACCAGATATCCTGAGGAAGTTGCTGAAGATTATTTGTATGAGCTCATTGAACGTAGTTTGGTTCAAGTAGCACAAATGAAGAGTTTTAGTGGAGGTGTCAAAACATGTCGCATCCATGATCTTCTTCGAGATCTGTGCATTTCTGAGAGCAAAGAAGACAAGCTTTTTGAAATTTGCATGGATAATAACATTTTGGCAAGAAGACAACCTCACAGGCTATCTCTTCATTGCAATGTGCCTCACTATGTTTCTTCAAGCAACAATGACCATTCAGTTGTACGTTCTATGTTTTGCTTTAACCAAGACTATCATTTGACTCCAAGCAACTGGAAACGGCTTTTCAAATCCTTCAAATCTGTTCGAGTATTAGATTTGGGCAGCAACCATTGTCTAAAGAATCTACAGACACTGGACATAGCAGGGCCTTGTAGGATGGTTGTCTTGATTTCTTTCCCCAATGGACCATGGAAACTAAAACAACTAAGGCACTTGCATACAATTAGGCCCATATTGCTACGTGGCAACCATCATTCAAGAGCAGTTGCTGAAGTTATGTGGAATCTTCAAACCATCTCTTCCATTGCACTCAATAGGCAAGTAGCATATCTATTTGAGAAAGGAAGCTTTCCAAAGCTTCAAAAGTTGGGTTTGCTAATCTCCTCAGGCAAGAAGGGGGAACTGCACACACTGTTGCCAATCCTACAACAATTAAGTCATCTGAATAAGTTACGAGTTTCCTTTGAATGGAAGAAGTCAGAAGTGCATTCATCCGCAAGCAACCACATGGAATGGCACATTGGATGCAAGCCACATGAACTGTTACAAAGCCTGCAACAGTTAACTAATCTGAGTTCATTGAAAATTATCAATGCTTGGGACCTTCCAACATGTCCTGTTGCATTTCCTCCATGCATTACAAAGCTAACTCTGTCAGGCATCACTTGCATGAATGAGGATGGGACGAATGCCATGGGAAGTCTCACTAGACTTCGAATTTTGAGATTATATGGGGGATATTCTTCCAATGATTCCTTTGAGATTAATTGTTCTGCAAGTAATGGGTTCCCACAGCTGCAGGTGTTCGAGATGAAAAAGTTGAAAGTTCATAACTGGAAATTAGCCAACGGTGCAATGCCATACCTTGAGCACTTGCTGATCGATTTTTGTCGACAGTTGGATGATCTCCCAAATGAATTGTGGTCTTTGAGTGCCCTGAGACAAGTGCATGTTTTGCGACCCTCTGAAGCATTGTCTCTCAGACTAAAAGATATTGAAATGAAGGATGGGTGTGAGCTCATAATCAGAGAGGGTAATTCCTATTTCTATGGAATTTAG 2733 0.419 MADGVVSFLLENLSQLLASEAKLLCGLEGRIRSLHSELEIINVLLKSFEGKRNKKEMEQVVANQIRDVAQEAEDVIDTFVANVAMHKRRSKLGRMFHGVSHTKLLHDVAEKIESIKANLSDIRENKIKYDVFQQESESSSTREDEERMQLLHKRRRDVEEHDVVGFVRESKTVIQLLSEDGSRSNVVSIIGMGGLGKTTLARKVYNSDEVKAYFNCRAWVYVSNDCRVKDLLLGILNCLMPNPEYECSSKKKGKKKKSKEKPRDLNTLSEDELKQIVQDCLKKKRYLLVLDDLWKAQDWDEVQDAFPNNNNGSKILITSRLKEVAIHTSQDPPFYLQLLTDEESWELFSKRVFRGEEFPFDLEDLGKQIVKSCHGLPLSLVVLAGLLAHKEKSYREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDYEIPVRQLLELWVAEGFIQQSGTRYPEEVAEDYLYELIERSLVQVAQMKSFSGGVKTCRIHDLLRDLCISESKEDKLFEICMDNNILARRQPHRLSLHCNVPHYVSSSNNDHSVVRSMFCFNQDYHLTPSNWKRLFKSFKSVRVLDLGSNHCLKNLQTLDIAGPCRMVVLISFPNGPWKLKQLRHLHTIRPILLRGNHHSRAVAEVMWNLQTISSIALNRQVAYLFEKGSFPKLQKLGLLISSGKKGELHTLLPILQQLSHLNKLRVSFEWKKSEVHSSASNHMEWHIGCKPHELLQSLQQLTNLSSLKIINAWDLPTCPVAFPPCITKLTLSGITCMNEDGTNAMGSLTRLRILRLYGGYSSNDSFEINCSASNGFPQLQVFEMKKLKVHNWKLANGAMPYLEHLLIDFCRQLDDLPNELWSLSALRQVHVLRPSEALSLRLKDIEMKDGCELIIREGNSYFYGI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01220 910 PANTHER DISEASE RESISTANCE PROTEIN RP 51 900 IPR044974 GO:0006952
Aip03g01220 910 CDD RX-CC_like 2 124 IPR038005 -
Aip03g01220 910 Gene3D - 151 332 IPR027417 -
Aip03g01220 910 SUPERFAMILY L domain-like 503 876 - -
Aip03g01220 910 Gene3D - 1 129 - -
Aip03g01220 910 PANTHER - 51 900 - -
Aip03g01220 910 Gene3D - 338 423 IPR042197 -
Aip03g01220 910 Pfam Rx N-terminal domain 5 91 IPR041118 -
Aip03g01220 910 PRINTS Disease resistance protein signature 581 597 - -
Aip03g01220 910 PRINTS Disease resistance protein signature 186 201 - -
Aip03g01220 910 PRINTS Disease resistance protein signature 373 387 - -
Aip03g01220 910 Gene3D - 424 515 IPR036388 -
Aip03g01220 910 Gene3D Ribonuclease Inhibitor 563 885 IPR032675 -
Aip03g01220 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 438 IPR027417 -
Aip03g01220 910 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Aip03g01220 910 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01220 Aip-Chr3 12097088 12099916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01220 187 511 WRKY Transcription Factor Family AT5G45050 25.526 4.75e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01220 - - adu:107477359 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01220 03 12097088 12099916 Aip03g01220 03 12097088 12099916 ECH