Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01218 ATGAAACTCGAGTCAGGGACTTGTAACGTTTGCTCAGCTCCTTGTTCGTCCTGCATTCATCTTAGTCGAGCTCTCACTCGACCAAAGGCCAAAGAGTTCTCTGATGAAAATTGTCACTTGGGGGAGGCCAATCTGTTTTCTACGGATGAGGGTGATCAATCTTCTCGTAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGCAGTGAAACCGGTAACATGCTTGGTGTTAATTCCTGTCATGAATCTATGTCTGAAAATGCTGAAAGCACACGAGCTTTATCAGAGAAGTACCGGGATGCCAAATTTTTAGAAGGTCTTGATGACAATGCTTCTTGTATCAGTAGAACCAGTGATGCTGATTTAATACCTGTTATTAATGGCAATACTGCTGTGCTTTCGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAAATCATAAAGTTCCAGTCCGTGATGGACTGCATGAGAAGCAAGGGGAGCAGGTTAAATCACCAGTCAAGCCTGAAGCTCACTCTGAAGATGAGAGTGATGACTCAGATGTTGAGCATGATGTAAAAGTTTGTGACATCTGTGGGGATGCTGGTCGGGAGGAGCTACTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTTCCAGAAGGAGACTGGTTATGTGAAGAATGCAAATATGCTCAGGAGACTGAAAATCAAAAGCTGGGTAAAATTAATTCAACTGCACATATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAAGCAAGCTCTTGAGTCAAACATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAGTATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCTTGATAAGGGAAAGTTGAATTCTGGTTACCACAGCTCCATTTGTAATCACCCTCATGGCAGTGACAGAGAACTTGCTCGCTCTCTTTCAGCTGGTCCTCGAAGTCAAACAACAAAGAGTACATTGTTGAAGTCAAATTCATTCAATACGAATTCCAACCCAAGAGTCAAACTTGTTGATGAAGTCCCACAAAAGAAGAAAGGGGGCAGCGAACATGCTTCTAAGAATAGTGAGACACCAAGGCAAATGATTAGCAAATCTACATCATTCAAATCATCGAATTTGAGCCGTTCAAGTGCCACTGAATCAAAAGTTAAAATGCTTACTTCTAAGTCTAGATCCACACAGGACCTGAAAGGATCAAGACTAACAAAAGAATCTGACAGGAAATTTCTCTCTAGGGTTGATCAGCCTGTGGTTTGTTCAACCATTTCCAAACCTATAGGTGACCATAAGCTTTCCCCTCATGGTGAGACCAGTAAACCTTCTGCAGTTAACAATCGAGAGTGTAAGGGCAACCCAGATGTGAGATCAAATTCATTATCTAAGAATAATATAAACCGCAAGAGTTCGGCACCTTTATTTAGTGCAGAAAGAATAGCAACCAGTGGTGAAGAAACTCAATTGGATGGGCCGCCTCAATCAAGAGAATTTTCAAATCAAATTGATAATACCAAAGATAGTTCTAGTGATCATGTGAGCTCTGGTCTTACTAATGCTTCTGGAAGCTCAGTCTTTCACAAAAGTAAGGATTTTGGCCATGCAACAGAATGTCGCGGGGTTGCTAATAGAGAAGAATTCAGCCTCGAAGGATCAACCACTGCCCCAAACAGTTCAAAAGACAAAATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGATCGAACTGATGAATTTTCTACATCAGGCACAGACTTGAATTCAGAAGTCAGTTCTCAGGATCAGGCGATTGTTATCAACACACCAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCAGGAGATCCTTCACAACCCAACATTTGAAACTCCATCTTCCAATGGTTCGAAGCCAGTTAGCTTTGGTCCAATACAGCCAAGAAAGTTAGAATCTGTTGGTCCTGATCCTGGAAATCCTGTAGTGAGAGATTTCCAGAATCAAGCTTTGGCTGTCTCAAGTGTTCTTTCACAGATAGCAGCCTTTCCAGAACATCAATTCATCTGGCAAGGTGTCTTTCAAGTGCACAGATATGGAAAGCTACCTAACTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCATCCCCCAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTCGATGAAGTTTCTCGCTTGAGCACTTGGCCTTCACAATTTCATCAAGGCAGGGCTAGGGAAGATAATATCGCTCTTTACTTTTTTGCCAAAGACATTGAAAGTTATAAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAGTTTTGATGGTGTTGAACTTCTCATATTCCCATCTAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGCTGTTTTTCTTATGGGGTGTATTTAGAGGACATAGGATGAATAATTTTGACTCTGCAAGAAAGGTTTGTATTCCCAGTTTGAACGTGGTGCCAGTTGAGAAGGATTTTCCAACTTCTGTCATGAATTTGTCTGAAACCCACAGCTCACTGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAGCACAGGCAGTGCAGTTCTCCCTTCCACTTCCATAGGTGAAGGCCCTAATGTTTTCCATGGGGATTTTGATATCAAAGAAACTAGTGACGAGGCATGTTTGGGTTCACAAGTAAACTTACATAGGCAAGATACTAGAATCAACACTGAATCTACATTGGAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAATTGCATTCCGCAGGTTCATCCCCGAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAGCAGGATTGTGGAAACAAATAGTGACTATGACATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTAAAAGTCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGGCCCATCTGTAACAATCATAAACTGTCAGCAAACCAATGATAAAAGAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTCAATGGAAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTATGGCCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCCGTTGATTCGCATAAGAAAAATGACTCACAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTATGTTCCCTTTTCTCGTCGGAGCTGTAGACAAGAAAAATAACCAGAAAAAACCACCTGAAGTAGTTGGGGATGAGCAAGAGGGCGACAACAGTGTTGCTGCATCTCTTTCGCTGTCTCTATCATTCCCATCATCAAATAAGGAACCTGTCAAACCTGCTCCAAAAGCTGAACATTCGACTGATGGGCATCATAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAGCAGGATTGTGGAAACAAATAGTGACTATGACATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTAAAAGTCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGGCCCATCTGTAACAATCATAAACTGTCAGCAAACCAATGATAAAAGAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTCAATGGAAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTATGGCCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCCGTTGATTCGCATAAGAAAAATGACTCACAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTATGTTCCCTTTTCTCGTCGGAGCTGTAGACAAGAAAAATAACCAGAAAAAACCACCTGAAGTAGTTGGGGATGAGCAAGAGGGCGACAACAGTGTTGCTGCATCTCTTTCGCTGTCTCTATCATTCCCATCATCAAATAAGGAACCTGTCAAACCTGCTCCAAAAGCTGAACATTCGACTGATGGGCATCATGTGAATACTCCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4920 0.4222 MKLESGTCNVCSAPCSSCIHLSRALTRPKAKEFSDENCHLGEANLFSTDEGDQSSRRSRTCERLNHASSETGNMLGVNSCHESMSENAESTRALSEKYRDAKFLEGLDDNASCISRTSDADLIPVINGNTAVLSTRVYPKSESDSDSDVGNVKDKNHKVPVRDGLHEKQGEQVKSPVKPEAHSEDESDDSDVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQETENQKLGKINSTAHISGKRPLESEELAKAAKKQALESNIGSPKGSSPKRVFPLSRESSFKNLDKGKLNSGYHSSICNHPHGSDRELARSLSAGPRSQTTKSTLLKSNSFNTNSNPRVKLVDEVPQKKKGGSEHASKNSETPRQMISKSTSFKSSNLSRSSATESKVKMLTSKSRSTQDLKGSRLTKESDRKFLSRVDQPVVCSTISKPIGDHKLSPHGETSKPSAVNNRECKGNPDVRSNSLSKNNINRKSSAPLFSAERIATSGEETQLDGPPQSREFSNQIDNTKDSSSDHVSSGLTNASGSSVFHKSKDFGHATECRGVANREEFSLEGSTTAPNSSKDKIHKDNRLKAAIQAALLRRPEICKKKEVPDRTDEFSTSGTDLNSEVSSQDQAIVINTPKNILSTEETKARQEILHNPTFETPSSNGSKPVSFGPIQPRKLESVGPDPGNPVVRDFQNQALAVSSVLSQIAAFPEHQFIWQGVFQVHRYGKLPNLYTGIQAHLSTCASPKVLEVVNKFLPEVSLDEVSRLSTWPSQFHQGRAREDNIALYFFAKDIESYKRHYKGLLDHMIRNDLALKGSFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGHRMNNFDSARKVCIPSLNVVPVEKDFPTSVMNLSETHSSLKRMDEQSIACGSTGSAVLPSTSIGEGPNVFHGDFDIKETSDEACLGSQVNLHRQDTRINTESTLEIPSSSGQLCQELHSAGSSPKDGQQRVPTPPEAMRTLVSSRIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSKSQISERINHDEDQHRPKRKLIEEDLNISIEATLQEGPSVTIINCQQTNDKRVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFMARANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGMFPFLVGAVDKKNNQKKPPEVVGDEQEGDNSVAASLSLSLSFPSSNKEPVKPAPKAEHSTDGHHKDGQQRVPTPPEAMRTLVSSRIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSKSQISERINHDEDQHRPKRKLIEEDLNISIEATLQEGPSVTIINCQQTNDKRVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFMARANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGMFPFLVGAVDKKNNQKKPPEVVGDEQEGDNSVAASLSLSLSFPSSNKEPVKPAPKAEHSTDGHHVNTPFLLFGRYTDK 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01218 1639 MobiDBLite consensus disorder prediction 428 443 - -
Aip03g01218 1639 ProSiteProfiles Zinc finger PHD-type profile. 196 247 IPR019787 -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1282 1317 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 141 185 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 469 502 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1293 1312 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1591 1607 - -
Aip03g01218 1639 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1310 1389 - -
Aip03g01218 1639 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1072 1308 - -
Aip03g01218 1639 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1392 1630 - -
Aip03g01218 1639 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 129 1070 - -
Aip03g01218 1639 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 123 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 511 556 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 137 192 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 385 427 - -
Aip03g01218 1639 PANTHER - 1310 1389 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1342 1368 - -
Aip03g01218 1639 PANTHER - 1072 1308 - -
Aip03g01218 1639 PANTHER - 1392 1630 - -
Aip03g01218 1639 PANTHER - 129 1070 - -
Aip03g01218 1639 PANTHER - 1 123 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 619 638 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 279 306 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1342 1382 - -
Aip03g01218 1639 SUPERFAMILY FYVE/PHD zinc finger 184 251 IPR011011 -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 978 997 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 319 558 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 978 992 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 340 367 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1575 1628 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1023 1049 - -
Aip03g01218 1639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 260 IPR013083 -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 369 384 - -
Aip03g01218 1639 MobiDBLite consensus disorder prediction 1023 1063 - -
Aip03g01218 1639 SMART PHD_3 198 245 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01218 Aip-Chr3 12078833 12086278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01218 195 255 C2H2 Transcription Factor Family AT3G01460 32.787 7.81e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01218 - - ahf:112789342 2450.63