Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01212 ATGATTAAATACATAAGAATATATCATGGTATGGAAATTTCAGCTGCAGTATGTTGGAAGGTTGGAGAGGGTGTGAAGATTGAAGAGATTCAAGTTGATCCACCAAAAGCAACTGAAGTTCGACTTAAGATGCTTTGTTCTAGCATCTGCCACACTGATATTTCAAGCATTCAAGGAACTCCTATGTTTAATTTTTATCCTCTAGCACTTGGACACGAAGGAGTTGGGGTTGTAGAAAGTGTTGGGGATGAAGTAAAGAGTTTGAAAGGAGGTGATATGGTGATTCCAATATTTGTAGGAGAGTGCAAAGAATGTGAGAATTGCATTTCAGGAAAATCAAATTTGTGCATGACATATCCTTTGAGCCTAACTGGCTTGATGCCAGATAACACTTCAAGGATGTCCTGCAGAGGCCAGAGGCTATACCACCCTTCGAGCTGTGCCACGTGGTCCGAGTACACGGTTATCGATGTTAACTACCTTGTTAAGGTTGATCCAAGCATTAATCCCGCTCATGCCAGTTTCATATCATGTGGGTTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTTGCTGTCTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGCAGCAAAAATGTTGGGGGCAACTAAGATAATAGGGATTGACATAAATGATATGAAGAGAGAAAAAGGTGAAGCTTTTGGAATGACTCACTTTATAAATTCAAGTAATTCTGATAAATCTCCTTCAGAATTGGTTAAAGAATTGAGTGATGGACTTGGTGTGGATTTTTCATTTGAGTGCACTGGAGTTGGCCCTTTGCTTACTGAATCATTAGAAGCTACAAAAGTGGGATCAGGTAAAACAATAACACTTGGTGTAGGAACTGAACCTTTTGTATCATTTGGTCTGTTTTCTATTCTTTTTGGAAGAACTTTGAAAGGATCAATATTTGGTGGGTTAAAATCCATATCAGACCTACCCATCATAGCTGACAAATGCATTAAACAGGAATTCCCTCTTCAAGAACTATTCACCCACGAGGTTCAATTAACAGATATAGAACAAGCATTTGAGCTGTTGAAACAACCCACTTGTGTGAAAGTTGTCATCAAGATATGA 1137 0.3958 MIKYIRIYHGMEISAAVCWKVGEGVKIEEIQVDPPKATEVRLKMLCSSICHTDISSIQGTPMFNFYPLALGHEGVGVVESVGDEVKSLKGGDMVIPIFVGECKECENCISGKSNLCMTYPLSLTGLMPDNTSRMSCRGQRLYHPSSCATWSEYTVIDVNYLVKVDPSINPAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISAAKMLGATKIIGIDINDMKREKGEAFGMTHFINSSNSDKSPSELVKELSDGLGVDFSFECTGVGPLLTESLEATKVGSGKTITLGVGTEPFVSFGLFSILFGRTLKGSIFGGLKSISDLPIIADKCIKQEFPLQELFTHEVQLTDIEQAFELLKQPTCVKVVIKI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01212 378 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Aip03g01212 378 SMART PKS_ER_names_mod 22 376 IPR020843 GO:0016491
Aip03g01212 378 SUPERFAMILY GroES-like 11 194 IPR011032 -
Aip03g01212 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 339 IPR036291 -
Aip03g01212 378 PANTHER ALCOHOL DEHYDROGENASE-RELATED 11 377 - -
Aip03g01212 378 Gene3D - 183 321 - -
Aip03g01212 378 CDD liver_alcohol_DH_like 15 377 - -
Aip03g01212 378 Gene3D - 16 373 - -
Aip03g01212 378 PANTHER ALCOHOL DEHYDROGENASE 11 377 - -
Aip03g01212 378 Pfam Alcohol dehydrogenase GroES-like domain 38 163 IPR013154 -
Aip03g01212 378 Pfam Zinc-binding dehydrogenase 206 325 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01212 Aip-Chr3 12018739 12020914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01212 38 368 Monolignol Biosynthesis Gene Families AT2G21730 25.000 1.25e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01212 K00121 - gmx:100798341 558.14