Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01211 ATGGTGATTCCAACGTTCATAGGAGAGTGCAAACAATGTGAGATTTGCATTTCAGGAAAATCCAATTTGTGCATGACAAACCCTTTAATGCTGAATGGATTGATGAGAGACAACACTTCAAGGTTGTCCTGCAAAGGCAAAAGGCTTCACCATATTTTCAGTTGTGCCACTTGGTCAGAGTACATGGTTGTTGATGCCAACTATGCTTTTAAAGTTGATCCAAGCATTGACCTAGCACATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGTTATGGTGCTGCTTGGAAGGAAGCTAAGGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGCGCTGTTGGATTGGGGGCCATCAGCGGAGCAAAAATGATGGGAGCAACTAAGATAATAGGGATTGACAAAAATGATATGAAAAGAGAAAAAGGAGAAATTTTTGGAATGACTCACTTTATAAATCCTAGTGATTCTGATATGCCTCCATCAGAATTGGTGAAAGAATTGAGTGATGGAAGAATGGGTGTGGATTATTCTTTTGAGTGCACTGGAATCAGCCATTTGATTATTGAGTCCCTACAAGCCACAAAAGTGGGAACAGGTAAAACAATTGTAATTGGTGCACCAACTGAACCAATTGAGCCATTTGGTTTTGCTTCAATCCTTAAAGGCAAGACTTTGAAAGGTTCTATCTTTGGAGGGTTAAAAGCAAATTCAGACCTTTCCATTATAGCTGACAAATGCCACAAAAGGGAATTTCCTCTTGAAGAATTATACACTCATGAGGTTCAATTGGCAGATATAAATCAAGCATTTGAGCTTTTGAAACAGCCCAATTGTGTGAAAGTTGTCATCAAGATATGA 864 0.3935 MVIPTFIGECKQCEICISGKSNLCMTNPLMLNGLMRDNTSRLSCKGKRLHHIFSCATWSEYMVVDANYAFKVDPSIDLAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDKNDMKREKGEIFGMTHFINPSDSDMPPSELVKELSDGRMGVDYSFECTGISHLIIESLQATKVGTGKTIVIGAPTEPIEPFGFASILKGKTLKGSIFGGLKANSDLSIIADKCHKREFPLEELYTHEVQLADINQAFELLKQPNCVKVVIKI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01211 287 SUPERFAMILY GroES-like 239 285 IPR011032 -
Aip03g01211 287 Gene3D - 91 230 - -
Aip03g01211 287 PANTHER ALCOHOL DEHYDROGENASE 1 286 - -
Aip03g01211 287 Gene3D - 2 282 - -
Aip03g01211 287 PANTHER ALCOHOL DEHYDROGENASE-RELATED 1 286 - -
Aip03g01211 287 Pfam Zinc-binding dehydrogenase 114 235 IPR013149 -
Aip03g01211 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 244 IPR036291 -
Aip03g01211 287 SUPERFAMILY GroES-like 2 102 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01211 Aip-Chr3 12014942 12017090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01211 3 279 Monolignol Biosynthesis Gene Families AT2G21730 22.581 1.21e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01211 K00121 - gmx:100798341 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01211 03 12014942 12017090 Aip03g01211 03 12014942 12017090 ECH