Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01204 ATGGGGGGTGGATTCAATGAAGAATATGGAAGAATAACAATGGAAGAAGAAGAAGAGAAGAATAAGTGGCCACCATGGTTGAAACCACTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATCAAGATTCTCATAAGAGTGAATGCAACATGTATTGTTTGGATTGTGTTAATGGTGCCCTTTGTTCTGCATGTTTGGCTTCACACAAAGATCATAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGAGTGTCTGAGATTCAGAAATTTCTGGACATAACAGGGGTCCAAACCTACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAGAGGCCTCAACCTAGGCCTGGAAAAGGTGTCACCAATACCTGCCAAGTTTGTGAGCGCAGCCTCCTTGATTCCTTCAATTTCTGCTCACTTGGTTGTAAGGTACAATCCGATCTTATCGTAACTGATCCAAAATATTTCTCATTTTAA 495 0.396 MGGGFNEEYGRITMEEEEEKNKWPPWLKPLLKTSFFVQCKVHQDSHKSECNMYCLDCVNGALCSACLASHKDHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKVQSDLIVTDPKYFSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01204 164 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 151 - -
Aip03g01204 164 Pfam PLATZ transcription factor 79 150 IPR006734 -
Aip03g01204 164 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01204 Aip-Chr3 11930932 11933698 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip03g01204 PLATZ 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01204 - - lja:Lj3g3v3639390.1 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01204 03 11930932 11933698 Aip05g01260 05 18354371 18356830 ECH
Aip03g01204 03 11930932 11933698 Aip03g01204 03 11930932 11933698 ECH