Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01193 ATGGCCACTACTGCTCCTCCTAATTCTTCAACATGTTCAACACCAATGAAAGCTGTATCCAACGGAGCATTCCAACATGAAAACCCTTTGGATTTTGCACTTCCATTGTTGATCCTTCAGATATGTTTGGTTGTTGCCTTCACCAGATTCCTTGCACTGATTTGCAGGCCTCTCAAACAACCTAGAGTCATTGCAGAAATTATTGGTGGAATACTACTTGGGCCATCTGCAATTGGGAGATATGAGAAATTCCTTAAGACAGTTTTCCCCAACAAAAGTTTAACTGTTCTTGAGACATTAGCCAATGTTGGTCTTTTGTTCTTCTTGTTTCTGGTTGGTCTTGAGCTAGACATTAGTTCGATTCGAAAAACAGGAGCTAAGGCCTTGTGCATAGCCCTTGCAGGGATCACATTCCCTTTTGTACTTGGCATTGGAACATCATTTGCTCTCAAAGCCACCATTTCCAAAGGTACTAATCCAACACCATTCCTTCTCTTCATGGGAGTTGCACTCTCAATCACAGCCTTTCCAGTCCTAGCTCGCATCCTAGCTGAGCTTAAACTCCTCACAACTGATGTTGGACGCATAGCAATGTCGGCTGCAGCTGTCAATGATGTTGCAGCATGGATACTACTTGCTCTGGCCATAGCCCTCTCTGGCTCAGAAACTTCCCCATTGATTTCACTTTGGGTCTTGCTTTGTGGTGCTGGTTTTGTTCTCTTTGCCATCTTTGCCATTAAACCAATTCTTAACATAATGGCTAAGCATTCGCTTGAGGGCGAGCCAGTGAAGGAGACCTACATATGCTTTACCTTGACACTAGTCCTGGCTTGCAGCTTTGTCACGGATGCCATTGGCATCCACGCGCTCTTTGGCGCATTTGTAGTAGGCGTAATTGTTCCCAAGGATGGCCCTTTTGCTGAGGTATTGACAGAGAAGATAGAAGACATTGTAACAGGCCTTTTCTTACCACTGTATTTTGTGTCAAGTGGATTGAAGACTGATGTGTCAAGTATAAGAGGAGCACTTTCTTGGGGATTGCTAGCACTAGTTATATTCACTGCTTGCTTTGGAAAGGTCATTGGCACATTCTCTGTTTCATTGTTATGTAAAGTTCCTTTTAGAGAAGCCTTGGCACTTGGATTTCTCATGAACACCAAGGGATTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTATTGAATGATCAGGCATTTGCAATATGTGTTTTGATGGCATTGTTCACCACCTTCATCACAACTCCAATAGTTATGGCAGTGTATAAGCCAGCTCGAAGAGGAGTACCATACGAGCATAAGATGATCCAGCGCAAGGATCCTGACACTGAGCTTCGGGTGCTAGCTTGCTTCCATAGCAACCGGAATATTCCTACCTTGATCAATTTGATAGAGTCATCAAGGGGAACTAGAAGGAGAGGGAAACTTTGCATATATGCTATGCATTTGATGGAACTCTCAGAGAGACCTTCAGCCATCACAATGGTTCATAAGGCGCGCAACAATGGACTTCCCTTTTGGAACAAAATACATGATGGCAAAGATAATTTGGTGATCGCATTTCAGGCTTTTGGACCCCTAAGCAGCGTCAATGTTCGCCCCATGACAGCAATCTCTTCTCTCAGTAATATCCATGAGGATATCTGCGCCAGCGCGCACCAAAAGAGAGCAGCAATGATTCTCCTCCCATTCCACAAACACCAACGCATTGATGGGACTATGGAGTCACTAGGACATTCATTTCGGATGGTGAATAATAATGTCCTGAGCCATGCTCCTTGCTCCGTGGGAATTTTGGTTGATCGTGGCCTTGGAGGGGAAAGACAAGTTCCAGCCAGTGATGTTTCCTACAATGTAGTGGCTGCATTCTTTGGAGGACGTGATGACCGCGAAGCACTAGCCTATGGTATGAGATTGGCTGAGCATCCCGGAATTTTGCTTACTGTCATCAAGTTTATAGCTCCACCAGGGCAGACATTCGCCTTTGGTGCCAACTTGGTTGGTCTAACAGCAAACAAGGACAAGAAGGTAATAACTGTGGCTGATGGAACAACCATTGATGAAGATAAAAGAGAGGATGACCAGTTTTGGTCTGAGTTCTTAAGTGTAAGCAGTAGTAGTGAAGAATCTATAGTGTATGAGGAAAGGTTGGTGGAAAACAAAGATGATGTTAAAAATGTATTGATGGAAAAGAGTAGGAGCAATCTAGTTTTGGTAGGTAGGATTCCACAAGTAGCACCTTTGGTAAACACAAGTGATTGTTCAGAGCTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCAGATTTCTCCACTTCTGCTTCTGTTGTAGTGTTTCAGCAATATAATCCAAAATCAGACATACACCCACTGGTACTGGAGGTTTCTGATTACTCAAATATGCCAGATACACCAAATCATCCTTTGTAG 2454 0.4389 MATTAPPNSSTCSTPMKAVSNGAFQHENPLDFALPLLILQICLVVAFTRFLALICRPLKQPRVIAEIIGGILLGPSAIGRYEKFLKTVFPNKSLTVLETLANVGLLFFLFLVGLELDISSIRKTGAKALCIALAGITFPFVLGIGTSFALKATISKGTNPTPFLLFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSETSPLISLWVLLCGAGFVLFAIFAIKPILNIMAKHSLEGEPVKETYICFTLTLVLACSFVTDAIGIHALFGAFVVGVIVPKDGPFAEVLTEKIEDIVTGLFLPLYFVSSGLKTDVSSIRGALSWGLLALVIFTACFGKVIGTFSVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGVPYEHKMIQRKDPDTELRVLACFHSNRNIPTLINLIESSRGTRRRGKLCIYAMHLMELSERPSAITMVHKARNNGLPFWNKIHDGKDNLVIAFQAFGPLSSVNVRPMTAISSLSNIHEDICASAHQKRAAMILLPFHKHQRIDGTMESLGHSFRMVNNNVLSHAPCSVGILVDRGLGGERQVPASDVSYNVVAAFFGGRDDREALAYGMRLAEHPGILLTVIKFIAPPGQTFAFGANLVGLTANKDKKVITVADGTTIDEDKREDDQFWSEFLSVSSSSEESIVYEERLVENKDDVKNVLMEKSRSNLVLVGRIPQVAPLVNTSDCSELGPVGSYLASSDFSTSASVVVFQQYNPKSDIHPLVLEVSDYSNMPDTPNHPL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01193 817 Pfam Sodium/hydrogen exchanger family 44 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip03g01193 817 Gene3D - 36 437 IPR038770 -
Aip03g01193 817 PANTHER CATION/H+ EXCHANGER 3 10 813 - -
Aip03g01193 817 PANTHER CATION/H + ANTIPORTER 10 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01193 Aip-Chr3 11820587 11823347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01193 9 808 Antiporter Super Family AT3G17630 68.875 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01193 - - gmx:100818975 1275.38