Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01186 ATGCACAAGCGTCGAACCATGCTGGGGAGGATGCTCCATGCTTTTGAACAAGTAAAGTTGCTCCATGATGTTGCGGAGAAAATAGACAGCATCAAAGCCAGTGTCAATGAAATAACAGAAAACAAGATGAAACTCACCAATGTCTTTCAACAAGAAGGTGAATCATCATCAGCAAGAGAGGATGAGGAGAGGGTGCTGTTGCTGCACAAGAGAAGAAGAAATGTGGAGGAACATGATGTCGTTGGTTTTGTTCGTGAATCAAAGGCAGTGATCCAGCTGCTTAAGGAAGAGACTTCCCAGAGCAATGTTGTCTCCATCATCGGTATGGGTGGCTTGGGCAAAACCACCCTTGCCCGAAAGGTCTATAACGGCGACGAGGTGAAGTCATATTTCAAATGTCGTGCATGGGTCTATGTGTCGAATGAGTACAGAGTTAAGGAGCTTTTGCTTGGCCTCATCAAGTGTTTGATGCCTAACGCTGAGAATGATAATGGGAAGAAAAAGAAAGGAAAGAAACAGAAGGGAAGAGAGAAACCAGGTGACCTGTCTAACTTGGATATCGACGAGCTAAAGCTAATGGTGCAGAATTTCTTGACCAAGAAACGGTATCTGGTCGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGAGGTACAAGATGCTTTTCCAAACGACAACAATGGTAGTAAAATACTCATCACTAGCCGTTTGAAAGAGGTGGAATCGCATACGAGTCCATATCCTCCTTATTACCTTCAATTCCTCGGTGATGATGAAAGTTGGGAACTCTTCTCCAAGAACGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGAATCTTGGAAAACAAATGATCAAAAGTTGCGGAGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGTTTAATGGCAAACAAGAGGAAGTCACACAGGGAATGGTGCAGAGTTGTGGGACATGTCAACTGGTATCTTACTCAAGATGAGTCCCAAGTTAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTACAAGACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATAGGTGTAAGGTCATTGCTGCAAAAATGGGTGGCTGAGGGATTTATTCAACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATGGTAGCTTGGTTCAAGCATCGCGAGTGAACTTTAATGGAGATGTGAAGGCATGTCGCATCCATGATCTTCTTCGTGATCTTTGCATATCTGAGAGCAAAGAGGACAACCTTTTTGAGGTTTGCACAAATAATAACATCTTGGAGAGATCAAAACCTCGCAGGCTTGCAATCCAATGTGGCATGCATCGTTATGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGCTCTTTGTTTTGCCTTTACCCATGA 1452 0.4366 MHKRRTMLGRMLHAFEQVKLLHDVAEKIDSIKASVNEITENKMKLTNVFQQEGESSSAREDEERVLLLHKRRRNVEEHDVVGFVRESKAVIQLLKEETSQSNVVSIIGMGGLGKTTLARKVYNGDEVKSYFKCRAWVYVSNEYRVKELLLGLIKCLMPNAENDNGKKKKGKKQKGREKPGDLSNLDIDELKLMVQNFLTKKRYLVVLDDLWKTQDWDEVQDAFPNDNNGSKILITSRLKEVESHTSPYPPYYLQFLGDDESWELFSKNVFRGEECPSDIENLGKQMIKSCGGLPLSIVVLAGLMANKRKSHREWCRVVGHVNWYLTQDESQVKDIVLKLSYDNLPTRLKPCFLYFGIYPEDFEIGVRSLLQKWVAEGFIQQTGTRNAEDVAEDYLYELIDGSLVQASRVNFNGDVKACRIHDLLRDLCISESKEDNLFEVCTNNNILERSKPRRLAIQCGMHRYVSSSNNDHSCVRSLFCLYP 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01186 483 Pfam NB-ARC domain 89 342 IPR002182 GO:0043531
Aip03g01186 483 Gene3D - 341 432 IPR036388 -
Aip03g01186 483 Gene3D - 63 247 IPR027417 -
Aip03g01186 483 PANTHER - 23 456 - -
Aip03g01186 483 PRINTS Disease resistance protein signature 103 118 - -
Aip03g01186 483 PRINTS Disease resistance protein signature 290 304 - -
Aip03g01186 483 Gene3D - 255 340 IPR042197 -
Aip03g01186 483 PANTHER DISEASE RESISTANCE PROTEIN RP 23 456 IPR044974 GO:0006952
Aip03g01186 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01186 Aip-Chr3 11770202 11771653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01186 104 427 WRKY Transcription Factor Family AT5G45050 25.994 1.55e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01186 - - aip:110269956 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01186 03 11770202 11771653 Aip03g01186 03 11770202 11771653 ECH