Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01184 ATGGCAGATAGTGTGATTTCCTTTGTCCTGGACAACTTGTCCAAATTGCTAGCACGTGAAGCCAATCTGCTATGTGGCGTGGATGAAAGGGTTAGATCCCTTGAAAGTGAGCTCAGCTTCATAAACGTGCACCTCAAAACATCTGAAGGGAAAACCAAGAAAGAAATTGACAAAGAAGTTTTTCGTCAGATTAGAGATGTTGCGCACGAAGCTGAGGATGTCATCGACACCTTTGTTGCCAATGTGGCTATGCACAGACGTCGAACCATGCTGGGGAAGATGCTCCATGGTTTTGAACATGGAAAGTTGCTCCGTGATGTGGCTGTGAAAATAGACAGCATAAAAGCCACTGTCAATGACATAAGAGACAACAAGATGAAGCTCAGCGATGTTTTTCAACAAGAAGGTGAATCATCATCAGCAAGAGAGGACGAGGAGAAGGTGCTGTTGCTGCACAAGAGAAGAAGAAATGTGGAGGAGCATGATGTAGTTGGTTTTGTTGGTGAATCCAAGGCAGTGATCCAGCTGCTTAAGGAAGAGAGTTCCCAAAGCAACGTTGTGTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTTCTCGAAAGGTCTATAACAGCGATCAGATGAAGTCATATTTCAATTGTCGTGCATGGGTTTTTGTTTCAAATGACTGCAGAGTTAAGGAGCTTTTGCTTGGCCTTATCAAGTGTTTGATGCCTAACGCTGAGAGCGAGCTTGGGAAGAAAAAGAAGGGAAAGAAACAGAAGCGAGGAATACAGAAACCAGGTGACCTCTCTAGCTTGGGTGTGGACGAACTAAAGCTCATGGTGCGGAATTTCTTGAGCATGAAAAAGTATCTGGTAGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGATGTAAAAGATGCTTTTCCAAACGACAAGAATGGTAGCAAAATACTCATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACAAGTCCATATTATCCTCCTTATTACCTTCAATTACTCGGTGATCATGAAAGTTGGGAACTCTTTTCTAGGAAAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGCATCTTGGAAAACAGATGGTCAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGGAGGGTTACTGGCAAACAAGGGGAAGTCATACAAGGAATGGTCCAAAGTTGTGGGACATGTCAACTGGTATCTTACTCAAGATGAGACCCAAGTCAAGGACATTGTGCTCAAACTCAGCTACCACAACTTGCCTTCAAGACTAAAGCCCTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATCTCTGTAAGGCCATTGCTGGAAAAATGGGTTGCTGAGGGATTTATTCAACAAACTGGTACCAGAGATGTAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATCGGAGCTTGGTTCAAGCATCCCGAGTGGATGTTAATGGAGATGTGAAGGCATGTCGCATTCATGATCTTCTTCGAGATCTTTGCATATATGAGAGCAAAGAGGACAAGCTTTTTGAGGTTTGCACAAATAGTAACATTTTGGAGACATCAAAACCACGCAGGCTTTCTATCCAATGCGGCATGGATCGGTATGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGCTCTTTGTTTTTCCATGACCCAAAAAGGTGTGAGATGAAATGGCTTTTCAAATTCTTCAAACTGGTTCGGGTATTAGATCTTGGGCGAAGCTATTGCAGCAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATCTAAGAATATTCGTACTAGGAAGTAGTTGTCAAGTCATTCCAGATTCTATATGCACACTAGAAAATTTACAAACTTTGGACATATATGGGCTGCTGCATACAATATATCTCCCTAGGAGAGTATGGAACCTCAAACAACTTAGGCATTTAAAGAGTAATGGAACCTTCATCCTACGAGGCCAGCATGGTTCAAAAGCAGGTGATCAAGTCATGTGGAATCTGCAAACCATCTCTATGATTAAATTCAATAGTCAGATTGCACGCATGATAGAGAAAGGAAGGTTTCCGAAGCTACGAAA 2123 0.4282 MADSVISFVLDNLSKLLAREANLLCGVDERVRSLESELSFINVHLKTSEGKTKKEIDKEVFRQIRDVAHEAEDVIDTFVANVAMHRRRTMLGKMLHGFEHGKLLRDVAVKIDSIKATVNDIRDNKMKLSDVFQQEGESSSAREDEEKVLLLHKRRRNVEEHDVVGFVGESKAVIQLLKEESSQSNVVSIIGMGGLGKTTLSRKVYNSDQMKSYFNCRAWVFVSNDCRVKELLLGLIKCLMPNAESELGKKKKGKKQKRGIQKPGDLSSLGVDELKLMVRNFLSMKKYLVVLDDLWKTQDWDDVKDAFPNDKNGSKILITSRLKEVASHTSPYYPPYYLQLLGDHESWELFSRKVFRGEECPSDIEHLGKQMVKSCGGLPLSIVVLGGLLANKGKSYKEWSKVVGHVNWYLTQDETQVKDIVLKLSYHNLPSRLKPCFLYFGIYPEDFEISVRPLLEKWVAEGFIQQTGTRDVEDVAEDYLYELIDRSLVQASRVDVNGDVKACRIHDLLRDLCIYESKEDKLFEVCTNSNILETSKPRRLSIQCGMDRYVSSSNNDHSCVRSLFFHDPKRCEMKWLFKFFKLVRVLDLGRSYCSKVPSNLGLFIHLRYLRIFVLGSSCQVIPDSICTLENLQTLDIYGLLHTIYLPRRVWNLKQLRHLKSNGTFILRGQHGSKAGDQVMWNLQTISMIKFNSQIARMIEKGRFPKLR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01184 707 PRINTS Disease resistance protein signature 375 389 - -
Aip03g01184 707 PRINTS Disease resistance protein signature 186 201 - -
Aip03g01184 707 PRINTS Disease resistance protein signature 626 642 - -
Aip03g01184 707 Gene3D - 5 108 - -
Aip03g01184 707 Gene3D - 149 331 IPR027417 -
Aip03g01184 707 SUPERFAMILY L domain-like 504 693 - -
Aip03g01184 707 PANTHER DISEASE RESISTANCE PROTEIN RP 45 692 IPR044974 GO:0006952
Aip03g01184 707 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Aip03g01184 707 Pfam Rx N-terminal domain 5 87 IPR041118 -
Aip03g01184 707 PANTHER - 45 692 - -
Aip03g01184 707 CDD RX-CC_like 2 123 IPR038005 -
Aip03g01184 707 Gene3D Ribonuclease Inhibitor 545 706 IPR032675 -
Aip03g01184 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 440 IPR027417 -
Aip03g01184 707 Gene3D - 341 425 IPR042197 -
Aip03g01184 707 Gene3D - 426 516 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01184 Aip-Chr3 11758698 11760820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01184 187 533 WRKY Transcription Factor Family AT5G45050 26.257 4.81e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01184 - - aip:110269956 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01184 03 11758698 11760820 Aip03g01184 03 11758698 11760820 ECH