Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01177 ATGGCAGATAGTGTGATTTCCTTTGTCCTAGACAACTTGTCCCAATTGCTAGCACGTGAAGCCAATCTGCTATGTGGCGTGGATAACAGGGTTACAACCCTTCAAAATGAGCTCAGCCTGATAAACGTGTTCCTCAAAACATCTGAAGGGAAAACCAAGAAAGAAATTTACAAAGAAATTCTTCGTCAGATCAGAGATGTTGCGCACCAAGCTGAGGATGTCATCGACACCTTTGTTGTCAACGTGGCTATGCACAGACGTCGAACCATGCTGGGGAAGATGCTCCGTGGTTTTGAACATGGAAAGTTGCTCCGTGATGTGGTTGTGAAAATAGACAGCATAAAAGCCACTGTCAATGACATAAGAGAGAACAAGATGAAGCTCAGCGATGTCTTTCAACAAGAAGGTGAATCATCATCAGCAATAGAGGACGAGGAGAAGGTGCTGTTGCTGCACAGGAGAAGAAGAAATGTGGAGGAGCATGATGTAGTTGGTTTTGTTGGTGAATCCAAGGCAGTGATCCAGCTGCTTAAGAAAGAGAGTTCCCAAAGCAACGTTGTGTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACACGGATGAGGTGATGTCATATTTCCATTGTCGTGCATGGGTTTATGTGTCAAATGACTGCCGAGTTAAGGAGCTTTTGCTTCGCCTTATCAACTGTTTGATGCCTAACGCTGAGAGCGAGCTTGGGAAGAAAAAGAAGGGAAAGAAACACAAGAGAATACAGAAACCAGGTGGCCTCTCTAGCTTGGGTGTGGACGAACTAAAGCTCAGGGTGCGGAATTTCTTGAGCATGAAAAAGTATCTGGTAGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGATGTAAAAGATGCTTTTCCAAATGACAATAATGGTAGCAAAATACTCATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACAAGTCCATATTATCCTCCTTATTACCTTCAATTACTCGGTGATCATGAAAGTTGGGAACTCTTTTCTAGGAAAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGCATCTTGGAAAACAGATGGTCAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGGAGGGTTACTGGCAAACAAGGGGAAGTCATACAAGGAATGGTCCAAAGTTGTGGGACATGTCAACTGGTATCTTACTCAAGATGAGACCCAAGTCAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTAGGAGACTAAAGCCCTGCTTTCTGTATTTGGGGATCTACCCTGAAGATTGTGAGATCTCTGTAAGGCCATTGCTACAAAAATGGGTTGCTGAGGGATTTATTCAACAAACTGGGAACAGAGATGTAGAGGAAGTTGCAGAAGATTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTGAATGTTAATGGAGATGTGAAAGCATGTCGCATCCATGATCTTCTTCGTGATCTTTGCATAACTGAGAGCAAAGAGGACAAGCTTTTTGAGGTTTGCACAAATAGTAACATTTTTTGGAGATCAAAACCACGCAGGCTTTCTATCCAATGCGGCATGCGTGGCTACGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGCTCTTTGTTTTGCCTTGACCCAAAAGGGTATGCTTTTACCCACAAGGAGAAGAAATGGCTTTTCAAATTCTTCAAACTGGTTCGGGTATTAGATCTTGGGCAAAACGTTTGCAGCAAGGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATGTAAGAATATGCACAAGAGGCAAAGTCATTCCAGATTCTATATGCACACTCGAAAATTTACAAACTTTGGACATATATGGGCCGGATGATGCAACATATCTCCCTAGGGGAGTATGGAACCTCAAACAACTTAGGCATTTAAAGTGTAGAGGAATCATGATCCTACGAGGCCAGCATGGTTCAAAAGCAGGTGATCAAGTCATGTGGAATCTGCAAACAATCTCTATGATTAAATTCAATAGTGAGATTGCACGCATGATAGAGAAAGGAAGGTTTCCCAAGCTACGAAAGTTGGGTTTGCACATCTCCTCGGTCAAGAAAAATAATGTGCATGAGTTGTTGTCAAGCCTACGGCGATTAACTCATCTGAACAAGTTGACACTTTCCTTTAGGAAGAGTGAATGGCCACCAGTGCGTACAAAGTACAAGCACATGGAAAGGAAGATCGGGCTCAAACCAATTGAATTGTTACAAAGCCTGCAGCAGTTGTCGAATCTGAGAACATTAGAAGTTCGTAGAGCTTTGGACCTTGCAACGTGTGATATTGCTTTTTGTTAA 2394 0.4315 MADSVISFVLDNLSQLLAREANLLCGVDNRVTTLQNELSLINVFLKTSEGKTKKEIYKEILRQIRDVAHQAEDVIDTFVVNVAMHRRRTMLGKMLRGFEHGKLLRDVVVKIDSIKATVNDIRENKMKLSDVFQQEGESSSAIEDEEKVLLLHRRRRNVEEHDVVGFVGESKAVIQLLKKESSQSNVVSIIGMGGLGKTTLARKVYNTDEVMSYFHCRAWVYVSNDCRVKELLLRLINCLMPNAESELGKKKKGKKHKRIQKPGGLSSLGVDELKLRVRNFLSMKKYLVVLDDLWKTQDWDDVKDAFPNDNNGSKILITSRLKEVASHTSPYYPPYYLQLLGDHESWELFSRKVFRGEECPSDIEHLGKQMVKSCGGLPLSIVVLGGLLANKGKSYKEWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIYPEDCEISVRPLLQKWVAEGFIQQTGNRDVEEVAEDYLYELIDRSLVQASRVNVNGDVKACRIHDLLRDLCITESKEDKLFEVCTNSNIFWRSKPRRLSIQCGMRGYVSSSNNDHSCVRSLFCLDPKGYAFTHKEKKWLFKFFKLVRVLDLGQNVCSKVPSNLGLFIHLRYVRICTRGKVIPDSICTLENLQTLDIYGPDDATYLPRGVWNLKQLRHLKCRGIMILRGQHGSKAGDQVMWNLQTISMIKFNSEIARMIEKGRFPKLRKLGLHISSVKKNNVHELLSSLRRLTHLNKLTLSFRKSEWPPVRTKYKHMERKIGLKPIELLQSLQQLSNLRTLEVRRALDLATCDIAFC 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01177 797 Gene3D Ribonuclease Inhibitor 573 794 IPR032675 -
Aip03g01177 797 Pfam Rx N-terminal domain 5 87 IPR041118 -
Aip03g01177 797 Gene3D - 143 330 IPR027417 -
Aip03g01177 797 Gene3D - 340 424 IPR042197 -
Aip03g01177 797 PRINTS Disease resistance protein signature 374 388 - -
Aip03g01177 797 PRINTS Disease resistance protein signature 186 201 - -
Aip03g01177 797 PRINTS Disease resistance protein signature 773 789 - -
Aip03g01177 797 SUPERFAMILY L domain-like 503 782 - -
Aip03g01177 797 Gene3D - 5 107 - -
Aip03g01177 797 Gene3D - 425 515 IPR036388 -
Aip03g01177 797 PANTHER DISEASE RESISTANCE PROTEIN RP 44 745 IPR044974 GO:0006952
Aip03g01177 797 CDD RX-CC_like 2 123 IPR038005 -
Aip03g01177 797 PANTHER - 44 745 - -
Aip03g01177 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 439 IPR027417 -
Aip03g01177 797 Pfam NB-ARC domain 172 427 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01177 Aip-Chr3 11660473 11663375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01177 164 792 WRKY Transcription Factor Family AT5G45050 22.014 5.68e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01177 - - aip:110269956 1556.96