Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01174 ATGGCAGATAGTGTGATTTCCTTTGTCCTGGACAACTTCTCCCAATTGCTAGCACGTGAAGCCAATCTGCTATGTGGCGTGGATGACAGGGTTAGATCCCTTCAAAGTGACCTCAGCATCATAAACGTGTTCCTCAAAACATCTGAAGGGAAAACCAAGAAAGAAATTGACAAAGAAGTTTTTCGTCAGATTAGAGATGTTGCGCACCAAGCTGAGGATGTCATCGACACCTTTGTGGTAAACGTGGCTATGCACAGACGTCGAACCATGCTGGGGAAGATGCTCCGTGGTTTTGAACATGGAAAGTTGCTCCGTGATGTGGCTGTGAAAATAGACAGCATAAAAGCCACTGTCAATGACATAAGAGACAACAAGATCAAGCTCGGCGATGTCTTTCAACAAGAAGGTGAATCATCATCAGCAAGAGAGGAGGAGGAGAGGGTGCTGTTGCTGCACAAGAGAAGAAGAAATGTGGAGGAGCATGATGTGGTTGGTTTTGTTCGTGAATCCAAGGCAGTCATTCAGCTGCTTAAGGAAGAGAGTTCCCAAAGCAACGTTGTGTCCATCATCGGTATGGGTGGCTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACAGCGATCAGGTAAAGTCATATTTCAAATGTCGTGCATGGGTTTATGTTTCAAATGACTGCAATGTCAAGAAGCTTTTGCTTGGCCTCATCATGTGTTTGATGCCTAACGCTGAGAACGAGCATAGGAGGAAAATGAAGGGAAAGAAACAAAAGGGAAGAAAGAAACCAGGTGACCTCTCTAACTTGAATGTTGACGAACTAAAGCTCATGATGCGGAATTTCTTGACTATGACAAGGTATCTGGTAGTCCTTGATGACCTCTGGAATACTCAAGACTGGGATGAGGTAAAAGATGCTTTTCCAAACGACAACAATGGTAGCAAAATACTAATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACGAGTCCATGTCCTCCTTATTACCTTCAATTCCTTGGTGATGATGAAAGCTGGGAACTCTTTTCTAGGAAAGTGTTTCGAGGAGATGAGTGTCCTTCTGATATAGAGCATCTTGGAAAACTGATGGTCAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTACTTGCAAACAAGGGGAAGTCATACAAGGAATGGTCCAAAGTTGTGGGACATGTCAACTGGTATCTTACTCAAGATGAGACCCAAGTCAAGGACATTGTACTCAAACTCAGCTACCACAACTTGCCTTCAAGACTAAAGCCCTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATCTCTGTAAGGCCATTGCTACAAAAATGGGTTGCTGAGGGATTTATTCAACAAACTGGGACCAGAGATGCAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCACAAGTGAATGTTAATGGAGATGTGAAAGCATGTCGCATCCATGATCTTCTTCGTGATCTTTGCATAACTGAGAGCAAAGAGAACAAGCTTTTTGAGGTTTGCACAAATAGTAACATTTTGGAGACATCAAAACCACGCAGGCTTTCAATCCAATGCGGCATGCATGGCTACGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGCTCTTTGTTTTGCCTTGACCCAAAAGGGTATGATGTTACCCCCAAGGAATTGAAATGGGTTTTCAAATTCTTCAAACTGGTTCGGGTATTAGATCTTGGGGAAAACTATTGCAGCAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATTTAAGAATAAGAAGTGGTGAAGTCATTCTAGATTCTATATGCACACTAGGAAATTTACAAACTTTGGACATATACGGGCCGGCGCTGCCTCCAATATATCTCCCTAGGAGAGTATGGAACCTCAAACAACTTAGGCATTTAAAGAGTAATGGAACCATCATCCTACGAGGCCACCATGGTTCAAAAGCAGGTGATCAAGTCATGTGGAATCTTCAAACCATTCATTCCATTAAATTCAATAGTGAGATTGCACGCATGATAGAGAAAGGAAGGTTTCCGAAGCTACGAAAGTTGGGTTTGCACATCTGGGTCGAGAAAAATAATGTGCATGAGTTGTTATCAACCCTACGGCGATTAACTCATCTGAACAAGTTGACACTTGTCTTTAGAAAGAAGAATTATGGACGGCGACCAGGGCCTACAAAGTACGAGCACATGGAATGGCACATCGGGCTCAAAGCAATTGAATTGTTACAAAGCCTGCAGCACTTGTCCAATCTGAGCACTTTAAAAGTTGATGGAGCTTTGGACCTTGCAACGTGTGATATTGCGTTTCCTGCATGCATTACAAAATTAACCTTGAGACACATTAGCTTCATGAATGCTGGTGGGGTGAATGCCATTGGTAATCTTACTACACTCCGATGTTTGAAATTGCATGGAACACATGACTTTGATGATCCCTTTGAGATTAATTGCAGTGCAGGCAGTTTCTCACAGCTCCAGGTTTTTGAGATGGAGTGGCTGAATGTTCACAAATGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTTTGCTTATCAGAGACTGTGAAAGATTGGACGATCTCCCAGATGAACTGTGGTCTTTGACTTCCCTGAGACAAGTACAAGTTGTGGAACCCTCCCAAGCATTGTCTCGTGCGCTAGCAAATTTGGAAATGAAGGATGAATGTGAGCTCATAATAACATAG 2790 0.4297 MADSVISFVLDNFSQLLAREANLLCGVDDRVRSLQSDLSIINVFLKTSEGKTKKEIDKEVFRQIRDVAHQAEDVIDTFVVNVAMHRRRTMLGKMLRGFEHGKLLRDVAVKIDSIKATVNDIRDNKIKLGDVFQQEGESSSAREEEERVLLLHKRRRNVEEHDVVGFVRESKAVIQLLKEESSQSNVVSIIGMGGLGKTTLARKVYNSDQVKSYFKCRAWVYVSNDCNVKKLLLGLIMCLMPNAENEHRRKMKGKKQKGRKKPGDLSNLNVDELKLMMRNFLTMTRYLVVLDDLWNTQDWDEVKDAFPNDNNGSKILITSRLKEVASHTSPCPPYYLQFLGDDESWELFSRKVFRGDECPSDIEHLGKLMVKSCGGLPLSIVVLAGLLANKGKSYKEWSKVVGHVNWYLTQDETQVKDIVLKLSYHNLPSRLKPCFLYFGIYPEDFEISVRPLLQKWVAEGFIQQTGTRDAEDVAEDYLYELIDRSLVQASQVNVNGDVKACRIHDLLRDLCITESKENKLFEVCTNSNILETSKPRRLSIQCGMHGYVSSSNNDHSCVRSLFCLDPKGYDVTPKELKWVFKFFKLVRVLDLGENYCSKVPSNLGLFIHLRYLRIRSGEVILDSICTLGNLQTLDIYGPALPPIYLPRRVWNLKQLRHLKSNGTIILRGHHGSKAGDQVMWNLQTIHSIKFNSEIARMIEKGRFPKLRKLGLHIWVEKNNVHELLSTLRRLTHLNKLTLVFRKKNYGRRPGPTKYEHMEWHIGLKAIELLQSLQHLSNLSTLKVDGALDLATCDIAFPACITKLTLRHISFMNAGGVNAIGNLTTLRCLKLHGTHDFDDPFEINCSAGSFSQLQVFEMEWLNVHKWKLGNGAMPCLQTLLIRDCERLDDLPDELWSLTSLRQVQVVEPSQALSRALANLEMKDECELIIT 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01174 929 Pfam Rx N-terminal domain 5 87 IPR041118 -
Aip03g01174 929 Gene3D Ribonuclease Inhibitor 548 920 IPR032675 -
Aip03g01174 929 Gene3D - 424 514 IPR036388 -
Aip03g01174 929 Gene3D - 338 423 IPR042197 -
Aip03g01174 929 Gene3D - 144 330 IPR027417 -
Aip03g01174 929 PANTHER - 44 927 - -
Aip03g01174 929 PANTHER DISEASE RESISTANCE PROTEIN RP 44 927 IPR044974 GO:0006952
Aip03g01174 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 438 IPR027417 -
Aip03g01174 929 Pfam NB-ARC domain 172 424 IPR002182 GO:0043531
Aip03g01174 929 PRINTS Disease resistance protein signature 186 201 - -
Aip03g01174 929 PRINTS Disease resistance protein signature 373 387 - -
Aip03g01174 929 PRINTS Disease resistance protein signature 773 789 - -
Aip03g01174 929 CDD RX-CC_like 2 123 IPR038005 -
Aip03g01174 929 Gene3D - 5 108 - -
Aip03g01174 929 SUPERFAMILY L domain-like 502 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01174 Aip-Chr3 11639699 11642488 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01174 187 531 WRKY Transcription Factor Family AT5G45050 24.079 2.09e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01174 - - adu:107477359 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01174 03 11639699 11642488 Aip03g01174 03 11639699 11642488 ECH