Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01168 ATGGCACCATCATTAGCAGCAACTTATTCCGTTGATCCAAAAGAAACCAACTTCATCAACAAAAGTTACCAAACTACCCACATCTTCAAATCAAAATTACCAGACATACCCATCAACAATACCATTCCTCTCCACACTTATTCGTTTCAAAAGCTCCCCCAAGTCTACAACCGCCCGTGTCTCATCACGAGCGATGGCAAGGAGTACACCTATGGTGATGTCCACCGCGCTTCTAGAAGCTTGGCATTGGGCCTTTTCAACCTTGGAATCCGCAAAGGTGACATCATAATGATCCTACTCCCAAACTCGCCGGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTGGGCGCAGCTTCCACCCTTGCCAATCCTTCTTACACATCTCTTGAAATCACGAAGCAGCTCAAAGCCACCAAAGCCAAAATCGTCATCACACATGCCATGCACGTGCATAAGCTCAAACAAGATCAACCAGAAGAAAACACATTCACAGTGATAACTGTGGACAAGCCACCAGAGAAGTGCATGAGTTTCTCGACGGTTTCCAGAAATGAAGGAGAGCTGCCAGAGGTGGATATTAACCCTGACGACATGGTGACACTGCCATTTTCGTCCGGCACGACGGGGTTATCAAAGGGTGTGGTTCTAACACACCGGAGTCTGGTAACAAACGTGGCTCAGCAGGTGGAGGGAGAGAACCCTAACTTGCACCTGAAGGAAGAGGATGTAGTGCTTTGTGTGTTACCCTTGTTTCACATTTACGCACTACACTGTGTGATGTTATGCTCTATGAGAGTAGGGTGTAAGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGCGATGTTGGAAGTTGTGGAGAAGCACAGGGTATCAGTAGTGATGGCAGTGCCGCCGTTGGTGGTGGCACTGTCAAAGAACCCGGCAGTGGAGGAGTATGAGCTTAGCTCCATCCGGATGGTGATGTCTGGAGGTGCCTCTCTTGCAAATGACATTGAGGAGGCTTTTCGTAGTAGGTTGCCTCAAGCAATCCTTCGACAGGCTTTAGGAATGACAGAATCAGGACCAGTGATATCAATGTCATTAAGTTTTGCAAAGTATCCAATGAAAACTAAATCAGGATCGTGTGGCAGTGTCATTAGAAATGCAGAAATGAAGATCATTGATCCTCTAACTGGCTCTTCTCTCCCTCGTAATATGTCGGGTGAAATTTGCATCCGAGGTCCACAAATTATGAAAGGATACCTGAATAATGAGAAGGCGACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACAGGTGACATTGGGTATGTGGATGATGATGATGAGCATTGA 1341 0.4653 MAPSLAATYSVDPKETNFINKSYQTTHIFKSKLPDIPINNTIPLHTYSFQKLPQVYNRPCLITSDGKEYTYGDVHRASRSLALGLFNLGIRKGDIIMILLPNSPEFVFSFWAASMLGAASTLANPSYTSLEITKQLKATKAKIVITHAMHVHKLKQDQPEENTFTVITVDKPPEKCMSFSTVSRNEGELPEVDINPDDMVTLPFSSGTTGLSKGVVLTHRSLVTNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHCVMLCSMRVGCKVLLMEKFEMRAMLEVVEKHRVSVVMAVPPLVVALSKNPAVEEYELSSIRMVMSGGASLANDIEEAFRSRLPQAILRQALGMTESGPVISMSLSFAKYPMKTKSGSCGSVIRNAEMKIIDPLTGSSLPRNMSGEICIRGPQIMKGYLNNEKATAEAIDEEGWLHTGDIGYVDDDDEH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01168 446 PANTHER 4-COUMARATE--COA LIGASE 3 27 445 - -
Aip03g01168 446 SUPERFAMILY Acetyl-CoA synthetase-like 41 444 - -
Aip03g01168 446 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Aip03g01168 446 Pfam AMP-binding enzyme 57 444 IPR000873 -
Aip03g01168 446 Gene3D - 19 446 IPR042099 -
Aip03g01168 446 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01168 Aip-Chr3 11555501 11558742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01168 25 445 Monolignol Biosynthesis Gene Families AT1G65060 61.268 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01168 K01904 - gmx:100790396 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01168 03 11555501 11558742 Aip03g01168 03 11555501 11558742 ECH