Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01166 ATGGATTTAGTATGTTTTGTGATGCTGCTGCTTCTTTTGACTTGCACCACTCTTTATTCTCTCCATTATCTAAATGTAAGAAGAAGCAAAGCAAACTATAAGCTTCCTCCAGGACCTTCTCCTCTTCCCATCATTGGAAACCTACATGAACTTGGAAATAAACCCCACCATTCTTCAGCCATTCTTGCAAAGATTCATGGCCCCATAATGACTTTGAAGTTGGGACAATTAACCACCATAGTGATCTCTTCAGCTGAAATGGCCAAAATGGTGCTTCAAACCTATGATCAGTTCTTATCGAATCGCACAGTTCCGGAGGCGGCAAGAGTTCACAATCACCATATTCATAGCATTGCCTTCATGCCTATGACACCTCTTTGGAGATCCCTTAGGAAGATATGCAACAATCAGTTATTCGCCAACAAGACTATTGACGCGAGGCAAGACTTGCGTCGCAAGAAAGTGCAAGAACTCCTTGGGGAGATCCATCAAAGTAGCCAAATTGGTGAAGGAGTGGATGTTGGAGAAGCAGCTTTCAAGACTACAATAAATTTATTGTCCAACACAATTTTTTCAATGGATTTGGTTCAATCTTCAGGTTCTGCTGCACGGTTCAAGGATTTAGTTGCCAATATCACCAAAGAGAGTGGAAAACCAAACTTGGCTGATTATTTTCCAGCCTTGAGAATGGTTGATCCACAAAGAATTAAAGCACACAATACCATTTATGCTGGGAAGTTATTGGATATCTTCCATGACTTGATTTACCAAAGGAAGAAGTTGATACTGAAAACAGGTTCTGACACCAATAAGGACATGTTAGAAGCTCTTCTTAACATTTCTCAAGAGAATAGCAAAGAGATGGACAAAATAAATATTGAACATTTAATGCTGACCTTATTTGTTGCTGGAACAGATACAATCACATCTACATTAGAATGGGCAATGACTGAATTACTCAGCAATCCAGACACTATGACAAAGGCTAAAAGGGAGCTTGAAGAAACAATTGGAAAGGGAAACCAAGTTGAGGAATCAGACATAGCAAGATTACCATATTTACAAGCAATATTGAAAGAGACATTTCGTTTGCACCCTTCAGTGCCTTTTTTGATCCCAAGAAAAGCTGACACTGATGTAGAAATCAATGGCTATACCATACCAAAAGGTTCACAAGTGCTAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTATGGAAGAATGACACAAATTTGTTCTCACCAGAGAGGTTCTTGGGATTAGAAACTGATGTTAGAGGGAGGCATTTTGAGTTGATACCATTTGGTGCTGGTAGAAGAATATGTCCTGGTTTAACATATGCTATGAGGATTTTGTTCTTGATGTTAGGTTCACTGGTTAATTGTTTTGATTGGAAGCTTGAAAATGATTCAAAAGCTGAGGATATTGATAAGGAAGAAGAATTTGGAATAACATTAAGAAAGTGTAAACCCCTTAGATCCATTCCAATCAAAGTAAATAACTAA 1509 0.383 MDLVCFVMLLLLLTCTTLYSLHYLNVRRSKANYKLPPGPSPLPIIGNLHELGNKPHHSSAILAKIHGPIMTLKLGQLTTIVISSAEMAKMVLQTYDQFLSNRTVPEAARVHNHHIHSIAFMPMTPLWRSLRKICNNQLFANKTIDARQDLRRKKVQELLGEIHQSSQIGEGVDVGEAAFKTTINLLSNTIFSMDLVQSSGSAARFKDLVANITKESGKPNLADYFPALRMVDPQRIKAHNTIYAGKLLDIFHDLIYQRKKLILKTGSDTNKDMLEALLNISQENSKEMDKINIEHLMLTLFVAGTDTITSTLEWAMTELLSNPDTMTKAKRELEETIGKGNQVEESDIARLPYLQAILKETFRLHPSVPFLIPRKADTDVEINGYTIPKGSQVLINVYAIGRDSNVWKNDTNLFSPERFLGLETDVRGRHFELIPFGAGRRICPGLTYAMRILFLMLGSLVNCFDWKLENDSKAEDIDKEEEFGITLRKCKPLRSIPIKVNN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01166 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Aip03g01166 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 501 - -
Aip03g01166 502 SUPERFAMILY Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g01166 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01166 Aip-Chr3 11546466 11548111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01166 3 499 Cytochrome P450 AT2G45550 45.527 4.91e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01166 - K23810 gmx:100805772 610.527