Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01155 atgaaggaagaaaaggagcattccgactcatggcatccgacggagGTCGGCCCCAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATCGCCGCTACCAGAACCAGAACCACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCAAAAGCCCTTGCTGGGTCTCACTCCCTTCATACTCGGCAAGCGCATACGTACCGACGACGACGCTTCCGCCAAGGATGACGACGTCTCCGTGGGGCCCGCTGTGGGGTCCTTAGTGGGCCATGGAGCTCCCGCGGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTTGGTCAAATTTGGAGTTTTGCAGCGGCTGCTCCTCGGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAACAGCAACAAGCTTCTTTGTTCGTTCACCATCGGCATCAGTAG 513 0.5712 MKEEKEHSDSWHPTEVGPKSDGQTIEWLLRQAEPSIIAATRTRTTPASFSSVSVSVRGGAGSLSSPSSTSAASSLDQKPLLGLTPFILGKRIRTDDDASAKDDDVSVGPAVGSLVGHGAPAGLWALPARPDFGQIWSFAAAAPREMVVQSAAVSVSQQQQASLFVHHRHQ 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01155 170 MobiDBLite consensus disorder prediction 1 24 - -
Aip03g01155 170 Pfam TCP family transcription factor 17 73 IPR017887 -
Aip03g01155 170 MobiDBLite consensus disorder prediction 39 76 - -
Aip03g01155 170 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 15 170 - -
Aip03g01155 170 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 170 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01155 Aip-Chr3 11433451 11433963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01155 15 166 TCP Transcription Factor Family AT5G23280 54.839 3.02e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g01155 TCP 7.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01155 K16221 - cpap:110813909 162.155