Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01131 ATGGAGAATAAAAGCATTACTACAAGTACTAGCAGTGGAAGTAATGGTGATGATGAGGGAAGTGAGAAGAGAGGAATGTACCTAGTTTGGGAAGACATAACTGTTGTGGTTCCAAACTTTGGCAATGGACACACAAAGAGGTTGCTTAATGGCTTGAATGGGTATGCTGAACCTAACAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTCTTCTTGATTCTTTGGCAGGTAGACTCGCTAGGAATGTTATCTTGTCTGGAAATGTGCTTTTAAATGGAAAGAAAAGAAGATTGGACTATGGTGGTGTTGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTAAGAGAAACAATAAGTTATTCAGCAAATCTAAGGCTTCCATCAAGAATGAGGAAAGAAGAGGTAAATGAGATTGTAGAAGGAACGATAATGGAGATGGGTCTTGAAGATTGTGCAGATAGGGTTATAGGGAATTGGCATTTGAGAGGAATAAGTGGTGGAGAAAGGAAAAGAGTAAGCATAGCAGTTGAGATATTAACAAGGCCTTGTCTCTTATTCCTTGATGAACCAACCACTGGCCTTGATAGTGCCTCTGCTTATTTTGTTGTTCAAACTTTGAGGAACATTGCTCATGATGGCAAGACTGTAATTTCATCCATTCATCAACCAAGTAGTGAGCTTTTTCAACTTTTTGATGATCTCTTCCTGCTTTCTCGAGGCCAAACTATTTATTTTGGACCAACTGAAAACTCACTCGAGTTCTTTGGGAAAGCAGGGTTCCCATGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTCCGCTGTATTAATTCAGACTTTGATACTGTCACAACCACCATCATGGCCTCCCAAAGAATCCATGAACACAACTCATTAACACCATCATTAGGGAACTTATCAACTGCCGCAATCAGAGCAAAACTCATTGAGAGATACCGTTGGTCTGAGTATGCAACCGCCGCAAGAACTAGAATCAAACAAATCTCCAACTTTGAAGGATATGATGGTGAAAGCAAAAGCAAGAATGAAGCGAAATGGTGGAAGCAACTAACAACATTGACTCATAGATCTTTGGTGAACATGAGTAGGGATGTAGGATACTATTGGATAAGGCTAGCAATCTACATAGCATTATCTTTATCTGTTGGAACAATCTTCTTTGATGTTGGAACAAGTTACAGAGCCATCTTTGCAAGAGGTGCATGTGGGGCTTTCATTTCTGGTTTCATGACATTCTTGTCCATTGGAGGCTTCCCCTCCTTCATAGAGGAAATGAAGGTGTTTTATAAAGAAAGGCTTAATGGATACTATGGAATTAGTGTCTACATTCTATCAAATTTTCTCTCTTCATTTCCCTTTGTTTCAATGATGTCCATTGCCACTGCCACCATAACGTATTATATGGTCAAGTTTCGTCCAGAATTTTCACATCTTTGTTACATCACCCTTGATCTTATTGGCTGCATTGCGGTTGTGGAGAGTTCCATGATGATCATAGCTTCATTAGTTCCCAACTTCCTCATGGGAGTAATAATAGGAGCAGGATATATTGGTGTAATGATGATGACTGCTGGCTACTTCCGTCAGATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATTTCATACATTAATTATGGGGCATGGGGATTACAGGGAGCATTCAAGAATGATTTGCTTGGGCTGGAGTTTGATCCTCTAGTACCAGGTGGTCCAAAGCTGAAAGGAGAAACCATACTCACAACCATGCTTGGCATGAGAATTGAATATTCAAAATGGTGGGACTTAGCTGCTGTCGTGTTCATCCTCATACTGCATAGAGTTCTCTTTTTTATCATTCTCAGATTCAAAGACCCCGCTTCACATTTCCTTTATAGTATCTATGCAAAGCAAGCAATGCAACGCATCAAGAAGAGGCCATCTTTCAGGAAAACACCATCTTTCTCTTCAAAGAGGCACCAAACACTGCATCCCTTGTCTTCTCAAGAGGGTCTCAACTCACCAATTCATTAA 2061 0.4051 MENKSITTSTSSGSNGDDEGSEKRGMYLVWEDITVVVPNFGNGHTKRLLNGLNGYAEPNRIMAIMGPSGSGKSTLLDSLAGRLARNVILSGNVLLNGKKRRLDYGGVAYVTQEDILLGTLTVRETISYSANLRLPSRMRKEEVNEIVEGTIMEMGLEDCADRVIGNWHLRGISGGERKRVSIAVEILTRPCLLFLDEPTTGLDSASAYFVVQTLRNIAHDGKTVISSIHQPSSELFQLFDDLFLLSRGQTIYFGPTENSLEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTIMASQRIHEHNSLTPSLGNLSTAAIRAKLIERYRWSEYATAARTRIKQISNFEGYDGESKSKNEAKWWKQLTTLTHRSLVNMSRDVGYYWIRLAIYIALSLSVGTIFFDVGTSYRAIFARGACGAFISGFMTFLSIGGFPSFIEEMKVFYKERLNGYYGISVYILSNFLSSFPFVSMMSIATATITYYMVKFRPEFSHLCYITLDLIGCIAVVESSMMIIASLVPNFLMGVIIGAGYIGVMMMTAGYFRQIPDLPKFFWRYPISYINYGAWGLQGAFKNDLLGLEFDPLVPGGPKLKGETILTTMLGMRIEYSKWWDLAAVVFILILHRVLFFIILRFKDPASHFLYSIYAKQAMQRIKKRPSFRKTPSFSSKRHQTLHPLSSQEGLNSPIH 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01131 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 23 681 - -
Aip03g01131 686 Pfam ABC-2 type transporter 229 286 IPR043926 GO:0140359
Aip03g01131 686 ProSitePatterns ABC transporters family signature. 172 186 IPR017871 GO:0005524
Aip03g01131 686 MobiDBLite consensus disorder prediction 1 16 - -
Aip03g01131 686 MobiDBLite consensus disorder prediction 663 686 - -
Aip03g01131 686 Gene3D - 16 263 IPR027417 -
Aip03g01131 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 272 IPR003439 GO:0005524
Aip03g01131 686 MobiDBLite consensus disorder prediction 656 686 - -
Aip03g01131 686 Pfam ABC-2 type transporter 364 573 IPR013525 GO:0016020|GO:0140359
Aip03g01131 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 269 IPR027417 -
Aip03g01131 686 CDD ABCG_EPDR 25 254 - -
Aip03g01131 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 681 - -
Aip03g01131 686 Pfam ABC transporter 49 199 IPR003439 GO:0005524
Aip03g01131 686 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g01131 686 SMART AAA_5 58 257 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01131 Aip-Chr3 11131961 11140608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01131 47 249 Calmodulin-binding Proteins AT2G36910 29.464 9.78e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01131 K05681 - gmx:100806806 1130.93