Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01130 ATGATGGAGATAGAAGCTGCAACAAGTGGAAGTAGCAATAGTAGTGGCTTGGATAGGGGAAGCTACTTAGCATGGGAAGATCTAAAAGTTTTTCTTCCAAATTTTGGAAAAGGACCAACTAAGAGGTTGCTTAATGGCCTCAATGGTTATGCTGAACCTGGAAGGATCATGGCTATTATGGGACCTTCTGGCTCTGGAAAATCCACACTCCTTGATTCACTTGCAGGTAGGCTCTCAAAAAATGTAGTCATGACAGGAAATGTTATTCTCAATGGGAAGAAGAAAAACCTAGGCTATGGCTTTGTTGCGTACGTAACACAAGAGGATGTGCTGCTGGGAACCCTAACAGTGAAAGAAACGATATCGTATTCGGCAAATCTAAGGCTTCCAACATCAATGTCGAAAGAAGAAATAGAGAACATCGTGGAAGGAACAATCATAGAGATGGGACTGCAAGACTGTGCTGACAGGTTAATCGGAAACTGGCACCTCAGAGGGATAAGCGGCGGGGAGAAGAAGAGGCTCAGCATTGCCCTTGAGATCCTCACAAAGCCAAGCTTGCTCTTTCTTGATGAACCTACCAGCGGCCTCGACAGCGCCTCCGCCTTCTTCGTCGTTCAGACTCTCCGCAATGTCGCTCGTGACGGCCGCACCGTCATCTCCTCCATTCACCAGCCTAGCAGCGAGGTCTTTGCTCTCTTTGATGACCTTTTCTTGCTCTCCGGCGGCGAAACCGTTTATTTTGGAGAAGCTAAAATGGCCGTTCAGTTTTTTGCTGAAGCTGGATTTCCTTGTCCACGTAAAAGGAATCCTTCTGATCACTTCCTTAGATGCATCAATTCTGACTTTGATGTTGTCACAGCTACACTCAAAGGATCTCAAAGAATTCACGATGTTCCAAATTCAGCAGATCCTTTCATGAATATGGCCACAGCACAAATTAAAGCAATGCTGGTTGATAGATATAGGCGTTCAACTTATGCAACAAGAGCAAAGGACAGGATTCAAGAACTATCTACTAATGAAGGGCTTGAAAATGAGAGACAAAAGGGAAGTCAAGCAACTTGGTGGAAGCAACTGAGGACATTGACAAAGAGATCATTTGTGAACATGTGTAGAGATGTTGGATACTACTGGTTGAGGATCATAATCTACATCATAGTTTCAATATGTGTTGGAACTATCTATTTTGATATTGGCTATAGCTATACCTCAATCCTAGCTCGTGGTGCTTGTGGTGCATTTATCTCAGGCTTCATGACATTCATGTCTATTGGAGGCTTCCCATCTTTCATTGAAGAAATGAAGGTTTTCTATAGAGAAAGGCTTAATGGATATTATGGAGTTGCAGCATATATTCTAGCCAACTTCCTATCTTCTTTCCCTTTCTTGGTTGCAATTGCTCTTACTACAAGCACCATCACATACAACATGGTGAAATTCAGGCCAGGGATCATTCACTTTGTGTTCTTCACTCTCAACATCTATGGTTGCATCTCTGTCATAGAGAGTCTCATGATGGTTGTAGCTTCTCTTGTTCCAAATTTCCTAATGGGGATCATCACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTGCATGGGCAATTCAGGGTGCATACAAGAATGACCTGCTTGGACTTGAGTTTGAACCTATGATACCAGGGGACCCAAAATTAACAGGAGAATATGTGATAACACACATGTTGGGAATTGAATTAAACCATTCAAAATGGTGGGACTTAGGAGCACTATTATTGATCCTCATAGTATATAGGCTTTTGTTCTTCACCATACTCAAGTTGAAGGAAAGAGCATCTCCATTGTTTAAAAACCTTTATGCAAAGAGAACCATTCAGCAACTTGAAAAGAGACCTTCATTCAGAAAAATGCCTTCTTTCCCTTCCATGAGGCATCAACCACTCCACTCTTTGTCTTCTCAAGAGGGTCTTAATTCTCCACTTCATTAG 2046 0.4242 MMEIEAATSGSSNSSGLDRGSYLAWEDLKVFLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVILNGKKKNLGYGFVAYVTQEDVLLGTLTVKETISYSANLRLPTSMSKEEIENIVEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTKPSLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVQFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNMATAQIKAMLVDRYRRSTYATRAKDRIQELSTNEGLENERQKGSQATWWKQLRTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFEPMIPGDPKLTGEYVITHMLGIELNHSKWWDLGALLLILIVYRLLFFTILKLKERASPLFKNLYAKRTIQQLEKRPSFRKMPSFPSMRHQPLHSLSSQEGLNSPLH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01130 681 SMART AAA_5 53 224 IPR003593 -
Aip03g01130 681 Pfam ABC transporter 44 195 IPR003439 GO:0005524
Aip03g01130 681 MobiDBLite consensus disorder prediction 654 681 - -
Aip03g01130 681 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524
Aip03g01130 681 Pfam ABC-2 type transporter 359 568 IPR013525 GO:0016020|GO:0140359
Aip03g01130 681 CDD ABCG_EPDR 20 249 - -
Aip03g01130 681 Gene3D - 23 261 IPR027417 -
Aip03g01130 681 Pfam ABC-2 type transporter 224 280 IPR043926 GO:0140359
Aip03g01130 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 256 IPR027417 -
Aip03g01130 681 MobiDBLite consensus disorder prediction 664 681 - -
Aip03g01130 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 19 676 - -
Aip03g01130 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 267 IPR003439 GO:0005524
Aip03g01130 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 19 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01130 Aip-Chr3 11107979 11115097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01130 39 236 Calmodulin-binding Proteins AT2G36910 32.258 1.43e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01130 K05681 - gmx:100777598 1205.66