Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01098 ATGATTGATATGGGTTCTTCATCAGTAATAGACGGTGAAGTTACACTTCCAGGATTCAGGTTTCACCCTACTGAAGAAGAGCTCCTTGATTTCTATCTCAAGAACATGGTCGTTGGAAAGAAGCTCCGTTTCGATGTCATAGGCTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCAGGGTTGGCGAAGGTAGGAGAGAGGGAATGGTATTTCTTTGTGCCTCGGGACAGAAAGCATGGAACCGGGGGAAGGCCAAACCGGACCACCGAGAAAGGGTTTTGGAAAGCAACCGGTTCGGACCGTAAGATCGTTACCTTGTCTGATCCGAAGCGCATCATTGGATTGAGGAAGACACTGGTTTTCTACGAGGGAAGAGCTCCACGTGGATCCAAGACCGATTGGGTCATGAATGAGTACC 424 0.4882 MIDMGSSSVIDGEVTLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01098 141 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Aip03g01098 141 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 13 141 - -
Aip03g01098 141 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 141 - -
Aip03g01098 141 Gene3D NAC domain 24 141 IPR036093 GO:0003677|GO:0006355
Aip03g01098 141 SUPERFAMILY NAC domain 8 141 IPR036093 GO:0003677|GO:0006355
Aip03g01098 141 ProSiteProfiles NAC domain profile. 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01098 Aip-Chr3 10656450 10656975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01098 13 141 NAC Transcription Factor Family AT2G17040 80.620 1.53e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g01098 NAM 2.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01098 - - adu:107477264 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01098 03 10656450 10656975 Aip03g01098 03 10656450 10656975 ECH