Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g01097 | ATGGCTTTCTTTGTTCGCTTCTCTCTGTTGTTGCTTCTTCTTTCTTCATCTGCCACCGCTTGTGATCGTTGCGTCCACCAATCCAAGGCTTCTTTTTTCTCCAAAGCCTCCGCTCTGTCATCTGGGGCGTGTGGTTATAGTGAATTGGCACTCTCGTTAAGTGCTGGAAACCTTGCAGCTGCTGTTCCTTCCATCTTCAGAGATGGTGCTGCTTGTGGTGCGTGCTTCCAGATTAGATGCAAGGACCCAAAGCTCTGCACAAAATCAGGAACCAGAGTGGTTCTTACTGATCTTAACAAAGATAACAAAACTGATTTTGTTCTTAGCACCAGAGCCTTTCAATCTTTGGCTCTCAAAGGAAAAGCTCAGCATCTTCTCAACCTTGGCATTCTTGACATTGAATACAAAAGGGTACCTTGTGAGTACAAAAACAAGAACCTGGCTGTTCGCGTTGAAGAATCAAGCAGGAAGCCAAATTACTTGGCTATTAAATTTTTGTATCAAGGTGGTCAAACTGACATTGTAGCCGTTGATGTAGCTAAGGTTGGGTCGTCAAACTGGAGTTTCTTAAGCAGAAATCATGGGGCGGTGTGGGACACAAGCAGGGTTCCAGAAGGGGCATTGCAGTTAAGGTTGGTTGTAACGGCAGGTTTTGATGGGAAGTGGATTTGGGCACAGAAGGAGGTTCTTCCGGCTGATTGGAAAAATGGTGTCATCTATGATTCTGGTGTTCAAATCACTGACATTGCTCAAGAAGGTTGTGCCACTTGCGATGATGGTTCTTGGCCATGA | 792 | 0.4533 | MAFFVRFSLLLLLLSSSATACDRCVHQSKASFFSKASALSSGACGYSELALSLSAGNLAAAVPSIFRDGAACGACFQIRCKDPKLCTKSGTRVVLTDLNKDNKTDFVLSTRAFQSLALKGKAQHLLNLGILDIEYKRVPCEYKNKNLAVRVEESSRKPNYLAIKFLYQGGQTDIVAVDVAKVGSSNWSFLSRNHGAVWDTSRVPEGALQLRLVVTAGFDGKWIWAQKEVLPADWKNGVIYDSGVQITDIAQEGCATCDDGSWP | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g01097 | 263 | PANTHER | EXPANSIN-B3 | 9 | 259 | - | - | |
Aip03g01097 | 263 | Pfam | Lytic transglycolase | 60 | 135 | IPR009009 | - | |
Aip03g01097 | 263 | SUPERFAMILY | PHL pollen allergen | 145 | 242 | IPR036749 | - | |
Aip03g01097 | 263 | Gene3D | - | 14 | 141 | IPR036908 | - | |
Aip03g01097 | 263 | SUPERFAMILY | Barwin-like endoglucanases | 10 | 144 | IPR036908 | - | |
Aip03g01097 | 263 | PRINTS | Major pollen allergen Lol pI signature | 80 | 90 | IPR005795 | GO:0005576|GO:0019953 | |
Aip03g01097 | 263 | PRINTS | Major pollen allergen Lol pI signature | 117 | 132 | IPR005795 | GO:0005576|GO:0019953 | |
Aip03g01097 | 263 | PRINTS | Major pollen allergen Lol pI signature | 150 | 165 | IPR005795 | GO:0005576|GO:0019953 | |
Aip03g01097 | 263 | PRINTS | Major pollen allergen Lol pI signature | 166 | 181 | IPR005795 | GO:0005576|GO:0019953 | |
Aip03g01097 | 263 | PRINTS | Major pollen allergen Lol pI signature | 218 | 235 | IPR005795 | GO:0005576|GO:0019953 | |
Aip03g01097 | 263 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 159 | 242 | IPR007117 | - | |
Aip03g01097 | 263 | PRINTS | Expansin/Lol pI family signature | 40 | 58 | IPR007118 | GO:0005576 | |
Aip03g01097 | 263 | PRINTS | Expansin/Lol pI family signature | 62 | 80 | IPR007118 | GO:0005576 | |
Aip03g01097 | 263 | PRINTS | Expansin/Lol pI family signature | 128 | 144 | IPR007118 | GO:0005576 | |
Aip03g01097 | 263 | PRINTS | Expansin/Lol pI family signature | 187 | 201 | IPR007118 | GO:0005576 | |
Aip03g01097 | 263 | PRINTS | Expansin/Lol pI family signature | 228 | 242 | IPR007118 | GO:0005576 | |
Aip03g01097 | 263 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | - | - | |
Aip03g01097 | 263 | Gene3D | - | 142 | 247 | IPR036749 | - | |
Aip03g01097 | 263 | Pfam | Expansin C-terminal domain | 148 | 231 | IPR007117 | - | |
Aip03g01097 | 263 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 41 | 145 | IPR007112 | - | |
Aip03g01097 | 263 | PANTHER | EXPANSIN-LIKE A1-RELATED | 9 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g01097 | Aip-Chr3 | 10644098 | 10645909 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g01097 | 1 | 257 | Expansin Gene Family | AT3G45960 | 62.162 | 1.76e-110 | 317 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g01097 | - | - | adu:107477263 | 502.671 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g01097 | 03 | 10644098 | 10645909 | Aip03g01097 | 03 | 10644098 | 10645909 | ECH |