Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01096 ATGGTTGTTGTTATTAGTGCAAAGAGGCTTATACAAATGGCTAGGAAGTGGCAGAAAATGGCAACATCTAAGCGCAAGACAATTTCATACCAAAGAAGAAACCCAGATGATTGTTATTATTCATCGGCGGCGGCGGCGGCGACGACGACGACAAACAAGGGTCACTTTGTAGTTTATAGTTTGGATGATAAGAGATTTGTGGTTCCATTGAAGTACCTTAGCACGAATGTGTTTAGGGAACTTCTTAAGTTGTCGGAAGAAGAGTTTGGGTTACCTTCGAACGGTCCAATTAGGTTACCATTTGATGGGGTTTTCTTGGACTATGTCATGTCTTTGTTGTTGCTTCAACAACGTAATGTTCCTCAAGATGTTGAGAAGGCATTGATTACTTCAATGGCTGCTTGTCACAGCCAAGCTTCTTCTTCTCATCATGATTGTTATTATGGTCTTAGGCAAAGCCATGAACAAACTATTATCTATGGCTTTTAA 489 0.4049 MVVVISAKRLIQMARKWQKMATSKRKTISYQRRNPDDCYYSSAAAAATTTTNKGHFVVYSLDDKRFVVPLKYLSTNVFRELLKLSEEEFGLPSNGPIRLPFDGVFLDYVMSLLLLQQRNVPQDVEKALITSMAACHSQASSSHHDCYYGLRQSHEQTIIYGF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01096 162 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 5 162 IPR003676 GO:0009733
Aip03g01096 162 Pfam Auxin responsive protein 10 113 IPR003676 GO:0009733
Aip03g01096 162 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01096 Aip-Chr3 10625517 10626071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01096 6 113 Calmodulin-binding Proteins AT4G34750 26.606 1.51e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01096 - - adu:107477310 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01096 03 10625517 10626071 Aip03g01096 03 10625517 10626071 ECH