Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01088 ATGGCGCCAGCTGCAGTGCCGTTGAATATTAAATGGTTGCCGCTGAATTCGAAGCTCAAAGCCAAGAGCCAACTCCAAACAAGCAGCAGGAACATTGAGTTTGAGAGGGTTCAGCTTCCGGAGAAGACCCGCAACTCGACAGTCTTGGTTCTTGGCGGAACAGGTAGGGTCGGTGGATCCACCGCCATTGCTCTCTCCAACCTTTGCCCCGATCTCCGCATCCTCGTCGCTGGCAGAAACAGAGAGAAAGGTGAAGCTTTGGTTGCAAAACTCGGGGGCAATTCTGGTTTTTCTCAGGTTGATCTCAATGATCAAGATTCACTCCAAACTGCTCTGCAAGATGTGGATCTTGTAGTTCATACGGCGGGGCCATTCCAACAAGCAGAAAAATGCAGTGTGCTTGAAGCTGCCATAAACACTAAGACTGCATATGTTGATGTTTGCGATGACACAAGCTATGCAGCGCGTGCAAAGTCCTTTATGAGCAGAGCGTTAGCTGCGAATGTTCCAGCTATAACAACAGGAGGAATATACCCTGGAGCTACTACCTGCTGCACGTCACGGTTTGGACGCCGACGGCCTTTCATTGCTGCCGGAGCCTTAGCGGTCGCCATTGCAGTGCTCCTTATAGGCTACGCTGCTGACATGGGACACATGTTTGGTGACTCGCTCGAGAAGAAGGCCCGCCCGCGTGCCATAGCCATCTTCGTGGTCGGGTTCTAG 723 0.5201 MAPAAVPLNIKWLPLNSKLKAKSQLQTSSRNIEFERVQLPEKTRNSTVLVLGGTGRVGGSTAIALSNLCPDLRILVAGRNREKGEALVAKLGGNSGFSQVDLNDQDSLQTALQDVDLVVHTAGPFQQAEKCSVLEAAINTKTAYVDVCDDTSYAARAKSFMSRALAANVPAITTGGIYPGATTCCTSRFGRRRPFIAAGALAVAIAVLLIGYAADMGHMFGDSLEKKARPRAIAIFVVGF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01088 240 Pfam Saccharopine dehydrogenase NADP binding domain 48 160 IPR005097 GO:0016491
Aip03g01088 240 PANTHER CARBOXYNORSPERMIDINE SYNTHASE 28 185 - -
Aip03g01088 240 PANTHER CARBOXYNORSPERMIDINE SYNTHASE 28 185 - -
Aip03g01088 240 Gene3D - 46 187 - -
Aip03g01088 240 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 218 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01088 Aip-Chr3 10575229 10577335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01088 185 240 Sucrose Transporter Gene Family AT1G71890 71.429 1.97e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01088 - - aip:107629586 344.739