Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01067 ATGGAAGCTGTTTTATTCGCCGCTAATCCAGCTTCTCACCTCAAACTTCTTCCCACTCTCAAACAACCCTTCTCTTCCACCCACCACCTCCCCTTCCGCCACAAAACCAACCACGTCCACCTCCCTCCTCTCTCCGCACTCCAAAACCAGAGCCAGCCAACTCCCACCGAAGATGAATCCTACGGCGAGGTCAAGAAAATCATCGGAAGCAGAGCCCTCGAAGGTGCCACTGGAATGGAGTACCTCATAGAGTGGAAAGACGGTCATGCCCCTTCCTGGGTCCCCTCTGACTTCATAGCCAAAGACGTCCTCTCCGAATACGAGTCTCCCTGGTGGACCGCAGCTAAGAAAGCCGACCACGACGCACTCCGTCAAATCCTCGACTCCGATGATGGTCGGGACGTCAACGCCGTCGACTCAGACGGCCGCACTGCCCTCCTCTTCGTCGCTGGACTGGGTTCTGAGCCCTGCGTCCGCCTCCTCGCGGAGTCCGGCGCCGATGTCGACCACCGCGACAACGCCGGCGGCCTCACCGCTCTCCACATGGCGGCGGGCTACGTGAGGCCCGGCGTCGCGAAGCTTCTCCTGGACCTCGGTGCGGATCCGGAAGGGGAGGACGATCGAGGGAGAACGGCGCTGGATCTGGCGAGGGAGCTTCTGAAGGCGACGCCGAAAGGGAATCCGATGCAGTTTGGGAGGAGGATTGGGTTGGAAGGGGTGGTTAGGGTTTTGGAAGGCGCGGTTTTCGAGTTCGCGGAGGTGGAGGAGATTATTGAGCGGAGGGGGAAGGGTGAGAATTTGGAGTACCTTGTGCGGTGGAAGGATGGTGGCGCCAACGAGTGGGTGAAGGCGAGGTTTGTGGCGGAGGATCTGGTTAGGGATTACGAAGCTGGCCTTGAGTACGCGGTGGCGGAGGCGGTGCTTGGGAAAAGGGTCGGCGATGAAGGGAGACCGGAGTTTTTAGTTAAGTGGGCTGATATGGATGAGCCCACTTGGGAGCCTGAGGAGAATGTGGATCCTGAACTCGTTAAGGAGTTTGAGTTAAGTAGTAATGGTCAGGCCCAAATTAGTAATGGGCCTATTCCGAGTAATGGGCCTGAAGTGGTGTTTTCGAATCAGGACAGCCTGTGA 1131 0.5809 MEAVLFAANPASHLKLLPTLKQPFSSTHHLPFRHKTNHVHLPPLSALQNQSQPTPTEDESYGEVKKIIGSRALEGATGMEYLIEWKDGHAPSWVPSDFIAKDVLSEYESPWWTAAKKADHDALRQILDSDDGRDVNAVDSDGRTALLFVAGLGSEPCVRLLAESGADVDHRDNAGGLTALHMAAGYVRPGVAKLLLDLGADPEGEDDRGRTALDLARELLKATPKGNPMQFGRRIGLEGVVRVLEGAVFEFAEVEEIIERRGKGENLEYLVRWKDGGANEWVKARFVAEDLVRDYEAGLEYAVAEAVLGKRVGDEGRPEFLVKWADMDEPTWEPEENVDPELVKEFELSSNGQAQISNGPIPSNGPEVVFSNQDSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01067 376 ProSiteProfiles Ankyrin repeat region circular profile. 175 207 - -
Aip03g01067 376 Gene3D - 106 247 IPR036770 -
Aip03g01067 376 ProSiteProfiles Ankyrin repeat region circular profile. 141 173 - -
Aip03g01067 376 Gene3D - 298 348 - -
Aip03g01067 376 CDD CD3_cpSRP43_like 299 348 - -
Aip03g01067 376 SUPERFAMILY Chromo domain-like 57 111 IPR016197 -
Aip03g01067 376 SUPERFAMILY Ankyrin repeat 107 218 IPR036770 -
Aip03g01067 376 MobiDBLite consensus disorder prediction 353 376 - -
Aip03g01067 376 ProSiteProfiles Chromo and chromo shadow domain profile. 302 347 IPR000953 -
Aip03g01067 376 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Aip03g01067 376 PANTHER HOMEOBOX PROTEIN WARIAI 5 354 - -
Aip03g01067 376 SMART chromo_7 250 300 IPR000953 -
Aip03g01067 376 SMART chromo_7 60 112 IPR000953 -
Aip03g01067 376 SMART chromo_7 301 351 IPR000953 -
Aip03g01067 376 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 5 354 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Aip03g01067 376 SUPERFAMILY Chromo domain-like 300 347 IPR016197 -
Aip03g01067 376 SMART ANK_2a 141 170 IPR002110 GO:0005515
Aip03g01067 376 SMART ANK_2a 106 137 IPR002110 GO:0005515
Aip03g01067 376 SMART ANK_2a 175 204 IPR002110 GO:0005515
Aip03g01067 376 Pfam Chromo (CHRromatin Organisation MOdifier) domain 304 347 IPR023780 -
Aip03g01067 376 SUPERFAMILY Chromo domain-like 250 297 IPR016197 -
Aip03g01067 376 Pfam Ankyrin repeats (many copies) 162 216 IPR002110 GO:0005515
Aip03g01067 376 Gene3D - 58 105 - -
Aip03g01067 376 Gene3D - 248 297 - -
Aip03g01067 376 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01067 129 216 CAMTA Transcription Factor Family AT5G09410 37.234 8.93e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01067 K12271 - gmx:100818382 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01067 03 10523692 10525233 Aip03g01067 03 10523692 10525233 ECH