Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01048 ATGAACGCAAGGGCTTGGCGCTTCCATGGAGCGAAATTATTCTCATCTAGCTTCAAGGCTACAGTGTTGATAGATGTGCGAACTGCGTTGTTTGTTGTTGTTGCGGAGGCTGCTGCGGAAGTGACGATAGCAGCAGAGTTCGTTGGCACATTTATGCTGATGTTCGCCGGAACAGCGGCGGCAATAACGAACAAGAAGACCAATGGATTGAAAAGTCTATTGGGCTGCGCTGTCGTCACCGGCCTTTGGGTGACGGTGATCATCCTGTGCACCGGACACATATCCGGTGCTCATCTGAACCCCGCTGTCACCATAGCATTTGCTGCCTTAAAGCACTTCCCTTGGAAGAAGTTCGCGAGAATGGCGGTGGGAGCCACTGTAACGTTCAACATCCTCATAGCTGGGGATTTCATTTTCAACCAGTAG 426 0.5094 MNARAWRFHGAKLFSSSFKATVLIDVRTALFVVVAEAAAEVTIAAEFVGTFMLMFAGTAAAITNKKTNGLKSLLGCAVVTGLWVTVIILCTGHISGAHLNPAVTIAFAALKHFPWKKFARMAVGATVTFNILIAGDFIFNQ 141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01048 141 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Aip03g01048 141 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g01048 141 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g01048 141 Pfam Major intrinsic protein 42 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g01048 141 Gene3D Glycerol uptake facilitator protein. 31 129 IPR023271 -
Aip03g01048 141 PANTHER AQUAPORIN NIP5-1-RELATED 35 117 - -
Aip03g01048 141 PANTHER AQUAPORIN NIP2-1 35 117 IPR034294 -
Aip03g01048 141 SUPERFAMILY Aquaporin-like 43 122 IPR023271 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip03g01048 Aip-Chr3 10216047 10219213 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01048 43 116 Major Intrinsic Protein MIP AT1G80760 71.622 2.68e-32 114
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01048 K09874 - gmx:100815637 125.946