Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01023 ATGGTTGCATCTTCCAAGAGTAGTTTCTTGATTGAGAAGGATGAGAACAATCACACACTTGGAGGTCGAAAAAGGGACTCTTCAGTTACCTTCAAGATTGAGGCTTTATACTCCCAAGAAATTTTGAATAGTGAATTAGAAAGGGTAGGAGCAGAATTCGTTGGCACTTTTATGCTGATTTTCGCCGGAACAGCGGTGGGAATAATAAACGAGAAGACCAACGGATTGGTAGGAGCAGAGTTCATTGGCACCTTTATATATGCTGATTTTTGCCAGAACAGCGGCGGGAATAATGAACGAGAAGACCAATTGATTGGTAACTCTTATGGGCTGCGCTGTCGTCATCGGCCTTGCGGTGACGGTGATCATCCTGTCCACCGGACACATATCCGGTGCTCATCTGAACCCTGCGGTCACCATTTGCTTTGCTGCCTTAAAGCACTTTCCATGGAAGAAGGTGCCAATGTATATTGGAACACAGATATTGGCATCAGTGTGTGCCGCATTTGCACTGAAGGAGTGTATCATCCGTTCATGGGGGGTGGAGTGACGGTTCCTTCAGGAGGATATGGCCAAGCTTTTACTTTAGAATTCATCATCAGCTTCAATCTCATGTTTGTTGTCACTGTTTTCGCCACTGACACTAGAACTGTTGGACAGTTCGCGGGAATGGCGGTGGGAGCCACTGTAACGTTCAACATCCTCATAGCTGGGTATGTCCTTCTATCAAAGTAA 735 0.4585 MVASSKSSFLIEKDENNHTLGGRKRDSSVTFKIEALYSQEILNSELERVGAEFVGTFMLIFAGTAVGIINEKTNGLVGAEFIGTFIYADFCQNSGGNNEREDQLIGNSYGLRCRHRPCGDGDHPVHRTHIRCSSEPCGHHLLCCLKALSMEEGANVYWNTDIGISVCRICTEGVYHPFMGGGVTVPSGGYGQAFTLEFIISFNLMFVVTVFATDTRTVGQFAGMAVGATVTFNILIAGYVLLSK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01023 244 SUPERFAMILY Aquaporin-like 163 239 IPR023271 -
Aip03g01023 244 PRINTS Major intrinsic protein family signature 47 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g01023 244 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g01023 244 PANTHER AQUAPORIN NIP5-1-RELATED 45 75 - -
Aip03g01023 244 PANTHER AQUAPORIN NIP5-1-RELATED 165 238 - -
Aip03g01023 244 PANTHER AQUAPORIN NIP2-1 45 75 IPR034294 -
Aip03g01023 244 PANTHER AQUAPORIN NIP2-1 165 238 IPR034294 -
Aip03g01023 244 Gene3D Glycerol uptake facilitator protein. 154 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01023 Aip-Chr3 9824989 9830949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01023 47 238 Major Intrinsic Protein MIP AT1G80760 42.051 1.30e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01023 K09874 - ming:122063799 135.191