LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g01019	ATGCAATTCTTTCACATTCCCTATCATTCCAACACAAAAACCATGACCAAACTCAGCAATCTCAATCTCAATCTTAATCTCACAACCCCCCAACAAGATCTTCCCAATGGAAACAACATCTTCACACTTAGTCTTTTTCTAATGCAACATATCCAAATGTTGGAGATTCTTCTAGCAATCACTGTTTTCATAGTGATTCATTCTCTAAGGCAAAAGAAGCATTATGGCTTACCAATTTGGCCTCTTCTTGGAATGTTACCTTCTTTGTTCTTTGCACTAAGAACTAACCTCTATGAATGGATCACTGATGTGCTTAAACAGCAAAATGGTACATTCAGATTCAAAGGGCCTTGGTTTAGCAGCCTCAACTGCATTGTCACGGCCGATCCGCGAAACCTCGAGCATCTTCTCAAGACAAAGTTTTCTTTGTTCCCCAAAGGGAGATACTTCAGGGACACGGTGAGAGACCTACTTGGAGATGGAATCTTCAACGCCGACGACGAGACTTGGCAGAAGCAGAGGAAAACAGCAAGCATTGAGTTCCATTCAGCAAAATTCAGGAAGTTAACTACTGAATCCTTGTTTGAGCTTGTTCATTCGAGGCTCTTACCGGTCTTAGAATCCGCCATTAAGGAGAATGTTTCCATTGATTTACAAGACATCTTGTTGAGACTAACTTTTGACAATGTTTGTTTGATTGCATTTGGGGTTGATCCCGGTTGCTTGCAGCCGGGGTTACCTAAAATACCATTTGCTAAGGCCTTTGAGGATGCAACAGAAGTAACAGTTCTTCGATTCGTTGTCCCAACATGTGTATGGAAGGCAATGAGGTTCCTCAATTTGGGGATGGAGAGAAAGTTGAAGGAATCTATAAAAGGGGTTGATGAGTTTGCTGAGAATGTTATTAGGACAAGAAAGAAAGAACTGTCTTTGTTCTGTGATGACAAGCAAAGATCAGATTTGTTAACCATTTTCATGGGGCTGAAGGATGAGAATGGTGAAGCCTATTCGGATAAGTTCTTGAGGGATATATGTGTGAACTTCATTCTTGCAGGGAGAGACACTTCTTCTGTGGCTTTAAGCTGGTTTTTCTGGCTGCTTGATCAGAACCCTGAAGTGGAAGAGAAGATAGTAGAAGAGATATGCAGGGTAGTGAAACAGAGAGAAGATATTGATATGAAAATGAATATGAAGAAAGAAGAGTTTTTTGAGGGTTTGACATTTAGGCCTGAAGAGATTAAGAAGATGGATTATTTGCATGCTGCTCTTTCTGAAGCTCTCAGATTGTACCCTTCTGTTCCTGTTGATCACAAAGAGGTAGTTGAAGATGACACATTCCCAGATGGAACAGTGCTAAAGAAGGGGACAAAAGTGATCTATGCAATTTATTCAATGGGGAGAATGGAAGCCATTTGGGGAAAAGATTGCAGGGAATTCAAGCCAGAAAGATGGCTAAGAGATAATGCACGCTTCATGAGTGAATCTGCATACAAATTCACTGCCTTTAACGGCGGACCGCGGTTGTGCTTAGGCAAAGACTTTGCTTACTATCAGATGAAATATGCCGCCGCTAGCATCATATTCCGCTACCGTGTTAAGGTGGTTGAGAACCACCCTGTGGTGCCTAAACTTGCATTGACTATGTACATGAAGCATGGAATCAAAGTTAGCCTTCACAAGAGGGATGCTGAAGAAATTTACAAGTACTTGCGAGGTTGA	1719	0.4148	MQFFHIPYHSNTKTMTKLSNLNLNLNLTTPQQDLPNGNNIFTLSLFLMQHIQMLEILLAITVFIVIHSLRQKKHYGLPIWPLLGMLPSLFFALRTNLYEWITDVLKQQNGTFRFKGPWFSSLNCIVTADPRNLEHLLKTKFSLFPKGRYFRDTVRDLLGDGIFNADDETWQKQRKTASIEFHSAKFRKLTTESLFELVHSRLLPVLESAIKENVSIDLQDILLRLTFDNVCLIAFGVDPGCLQPGLPKIPFAKAFEDATEVTVLRFVVPTCVWKAMRFLNLGMERKLKESIKGVDEFAENVIRTRKKELSLFCDDKQRSDLLTIFMGLKDENGEAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPEVEEKIVEEICRVVKQREDIDMKMNMKKEEFFEGLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKVIYAIYSMGRMEAIWGKDCREFKPERWLRDNARFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVVENHPVVPKLALTMYMKHGIKVSLHKRDAEEIYKYLRG	572

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g01019	572	Pfam	Cytochrome P450	79	546	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	E-class P450 group I signature	340	357	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	E-class P450 group I signature	509	532	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	E-class P450 group I signature	499	509	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	E-class P450 group I signature	360	386	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	E-class P450 group I signature	420	438	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	502	511	IPR017972	GO:0005506\|GO:0016705
	Aip03g01019	572	SUPERFAMILY	Cytochrome P450	76	561	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	P450 superfamily signature	351	368	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g01019	572	PRINTS	P450 superfamily signature	509	520	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g01019	Aip-Chr3	9763697	9767006	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g01019	45	569	Cytochrome P450	AT5G23190	74.667	0.0	830

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g01019	K15402		-	gmx:100809503	901.353

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